LOCUS BC064943 2107 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LETM1 domain containing 1, mRNA (cDNA clone MGC:74666
IMAGE:6009854), complete cds.
ACCESSION BC064943
VERSION BC064943.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2107)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2107)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: a Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67089166.
FEATURES Location/Qualifiers
source 1..2107
/db_xref="H-InvDB:HIT000261651"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74666 IMAGE:6009854"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2107
/gene="LETMD1"
/gene_synonym="1110019O13Rik"
/gene_synonym="DKFZp586A011"
/gene_synonym="HCCR-2"
/gene_synonym="HCCR1"
/db_xref="GeneID:25875"
/db_xref="HGNC:HGNC:24241"
CDS 5..1087
/gene="LETMD1"
/gene_synonym="1110019O13Rik"
/gene_synonym="DKFZp586A011"
/gene_synonym="HCCR-2"
/gene_synonym="HCCR1"
/codon_start=1
/product="LETM1 domain containing 1"
/protein_id="AAH64943.1"
/db_xref="GeneID:25875"
/db_xref="HGNC:HGNC:24241"
/translation="MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRSSK
LHLSPKADVKNLMSYVVTKTKAINGKYHRFLGRHFPRFYVLYTIFMKGLQMLWADAKK
ARRIKTNMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGIISIPPFANYLVFLLMYL
FPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPLISDAGLRWRLTDLC
TKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLLRHRL
KTHTTVIHQLDKALAKLGIGQLTAQEVKSACYLRGLNSTHIGEDRCRTWLGEWLQISC
SLKEAELSLLLHNVVLLSTNYLGTRR"
BASE COUNT 522 a 495 c 491 g 599 t
ORIGIN
1 gaagatggcg ctctccaggg tgtgctgggc tcggtcggct gtgtggggct cggcagtcac
61 ccctggacat tttgtcaccc ggaggctgca acttggtcgc tctggcctgg cttggggggc
121 ccctcggtct tcaaagcttc acctttctcc aaaggcagat gtgaagaact tgatgtctta
181 tgtggtaacc aagacaaaag cgattaatgg gaaataccat cgtttcttgg gtcgtcattt
241 cccccgcttc tatgtcctgt acacaatctt catgaaagga ttgcagatgt tatgggctga
301 tgccaaaaag gctagaagaa taaagacaaa tatgtggaag cacaatataa agtttcatca
361 acttccatac cgggagatgg agcatttgag acagttccgc caagacgtca ccaagtgtct
421 tttcctaggt attatttcca ttccaccttt tgccaactac ctggtcttct tgctaatgta
481 cctgtttccc aggcaactac tgatcaggca tttctggacc ccaaaacaac aaactgattt
541 cttagatatc tatcatgctt tccggaagca gtcccaccca gaaattatta gttatttaga
601 aaaggtcatc cctctcattt ctgatgcagg actccggtgg cgtctgacag atctgtgcac
661 caagatacag cgtggtaccc acccagcaat acatgatatc ttggctctga gagagtgttt
721 ctctaaccat cctctgggca tgaaccaact ccaggctttg cacgtgaaag ccttgagccg
781 ggccatgctt ctcacatctt acctgcctcc tcccttgttg agacatcgtt tgaagactca
841 tacaactgtg attcaccaac tggacaaggc tttggcaaag ctggggattg gccagctgac
901 tgctcaggaa gtaaaatcgg cttgttatct ccgtggcctg aattctacgc atattggtga
961 agataggtgt cgaacttggc tgggagaatg gctgcagatt tcctgcagcc tgaaagaagc
1021 tgagctgtct ctcttgctgc acaacgtggt cctgctctcc accaactacc ttgggacaag
1081 gcgctgaatg aaccatggag cggatggcat tgtcctgcag tcgtatagta tagcagtgca
1141 ggaacaaaca gcacttgcca gcaaagtctg tgtgtactgt taagtgtgtg ggaggcagag
1201 agaggagcag gggccatggg cttcacagca tggcacacct gtgggaactg cagacattcc
1261 tctcacagct agaactgaaa caaaccctct tgctaggggt ggtccgtgtg aggtgtcatc
1321 ctgtccccct cataattact aatagctgga actggcagca gcctctactg ggcttttact
1381 gtgatgtgtt cagttcatgt cctaggaagt cagcttttgc cccaggtggg aatccttatt
1441 tggcttagga ctgatccact tccatgttac ttacatctgt gggtttttgt tgttgctgtt
1501 agaaaatttt tggctggtga aaacagcact cctttggctg gagcacttgt gtccatgcat
1561 gtacttgggt gtttccctcc atcctttctg atatgaccaa aaatcaagtt gttttgtttt
1621 ttgtcacctt cactggcatg ggctaaccac ttctttttca aaccctctga acaccttttt
1681 ctgatgggta acttgcagga atattctatt ggaaaagata acaggaagta caagtgcttc
1741 ttgacccctt cctcaatgtt tctagccttc actctccatt gtcttttctg ggctgtatta
1801 cagccctctg tggatcttca actctgctgc ctccactgtg atgcagcagt ccaactgtaa
1861 ctgacagtgg ctgccttctc tgggccatgg atcacacctg taaggtacta attactgccc
1921 agcctgggga gatcaggaga ggtctgcata gttagtaagt tgggtttagc ttttgtgtgt
1981 gcatcagtga cttagagttc tgtaataact tattgtaaat gcatgaagca ctgtttttaa
2041 acccaagtaa agactgcttg aaacctgttg atggaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaa
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