LOCUS BC064903 1400 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens ring finger protein 115, mRNA (cDNA clone MGC:70861
IMAGE:6020168), complete cds.
ACCESSION BC064903
VERSION BC064903.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33859667.
FEATURES Location/Qualifiers
source 1..1400
/db_xref="H-InvDB:HIT000261613"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70861 IMAGE:6020168"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1400
/gene="RNF115"
/gene_synonym="BCA2"
/db_xref="GeneID:27246"
/db_xref="HGNC:HGNC:18154"
CDS 49..963
/gene="RNF115"
/gene_synonym="BCA2"
/codon_start=1
/product="ring finger protein 115"
/protein_id="AAH64903.1"
/db_xref="GeneID:27246"
/db_xref="HGNC:HGNC:18154"
/translation="MAEASAAGADSGAAVAAHRFFCHFCKGEVSPKLPEYICPRCESG
FIEEVTDDSSFLGGGGSRIDNTTTTHFAELWGHLDHTMFFQDFRPFLSSSPLDQDNRA
NERGHQTHTDFWGARPPRLPLGRRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPG
SPHPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVT
QEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED
STRQSQSTEASASNRFSNDSQLHDRWTF"
BASE COUNT 403 a 320 c 319 g 358 t
ORIGIN
1 gagggacggg ccggctgccc tctcggacgg ccgcggcgga gggcaaaaat ggcggaggct
61 tcggcggccg gggcggactc gggcgccgct gtagccgccc accggttttt ctgccacttt
121 tgcaagggcg aggtcagccc caaactaccg gaatatatat gtcccagatg tgaatcaggc
181 tttattgaag aagtgacaga tgattccagt tttttaggtg gtggcggcag tcggatagac
241 aataccacaa caacacattt tgcagagctt tggggccatt tggatcacac gatgtttttt
301 caagatttta gaccctttct aagtagcagt ccactggacc aagataatag agccaatgaa
361 aggggtcacc agactcacac tgacttctgg ggagcaagac ctccacggtt gccattgggt
421 cggagataca gatctcgagg aagttctcgt cctgacagat ctccagctat tgaaggaata
481 ctacaacaca tctttgcagg attctttgca aattctgcca ttcctggatc tccacaccct
541 ttttcctgga gcgggatgct gcactccaac cctggggact atgcctgggg tcagacaggg
601 cttgatgcca ttgtaaccca gcttttagga caactggaaa acacaggccc tcccccagct
661 gacaaggaaa agatcacatc tcttccaaca gtgacagtaa ctcaggaaca agttgatatg
721 ggtttagagt gtccagtatg caaagaagat tacacagttg aagaggaagt ccggcagtta
781 ccttgcaatc acttctttca cagcagttgt attgtgccgt ggctagaact gcatgacaca
841 tgtcctgtat gtaggaagag cttaaatggt gaggactcta ctcggcaaag ccagagcact
901 gaggcctctg caagcaacag atttagcaat gacagtcagc tacatgaccg atggactttc
961 tgaagctaaa gaccacacct gaatcagggc tgtggtaatc atcttaccat agctgtaaat
1021 tgtatcaaaa caaaaaatta gtagatggat ttaggaatat gtaagaaact caacacataa
1081 tataaatgca atgaatgttt ttcttcttta aatttaaagt tagtatctac agatggaatt
1141 gtatctacaa ccaaatgcct cttatccctg aattcagagt gataatttta taagtgtgaa
1201 acttaattat gtagggctcc ccccgtctga atagaattaa ttccttaaag tctagttagg
1261 gtcctgctgt ctgtcatgtt gccttgtaac ggatgtttcc acctccttct ccaacctcta
1321 ccccaccatt agtgtatttt actataaaaa cagtggaacc acagccctaa agtcctgctg
1381 atataaaaaa aaaaaaaaaa
//