LOCUS BC064807 2947 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched), mRNA (cDNA clone MGC:65158 IMAGE:5726473), complete cds. ACCESSION BC064807 VERSION BC064807.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2947) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2947) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: h Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22095374. FEATURES Location/Qualifiers source 1..2947 /db_xref="H-InvDB:HIT000261584" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:65158 IMAGE:5726473" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_124" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2947 /gene="PTPN5" /gene_synonym="FLJ14427" /gene_synonym="PTPSTEP" /gene_synonym="STEP" /db_xref="GeneID:84867" /db_xref="HGNC:HGNC:9657" /db_xref="MIM:176879" CDS 196..1893 /gene="PTPN5" /gene_synonym="FLJ14427" /gene_synonym="PTPSTEP" /gene_synonym="STEP" /codon_start=1 /product="protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)" /protein_id="AAH64807.1" /db_xref="GeneID:84867" /db_xref="HGNC:HGNC:9657" /db_xref="MIM:176879" /translation="MNYEGARSERENHAADDSEGGALDMCCSERLPGLPQPIVMEALD EAEGLQDSQREMPPPPPPSPPSDPAQKPPPRGAGSHSLTVRSSLCLFAASQFLLACGV LWFSGYGHIWSQNATNLVSSLLTLLKQLEPTAWLDSGTWGVPSLLLVFLSVGLVLVTT LVWHLLRTPPEPPTPLPPEDRRQSVSRQPSFTYSEWMEEKIEDDFLDLDPVPETPVFD CVMDIKPEADPTSLTVKSMGLQERRGSNVSLTLDMCTPGCNEEGFGYLMSPREESARE YLLSASRVLQAEELHEKALDPFLLQAEFFEIPMNFVDPKEYDIPGLVRKNRYKTILPN PHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHT PIIVMITNIEEMNEKCTEYWPEEQVAYDGVEITVQKVIHTEDYRLRLISLKSGTEERG LKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHCSAGIGRTGCFIA TSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLYEKQLSHQSPE" BASE COUNT 628 a 891 c 825 g 603 t ORIGIN 1 cgcagacaca cgcacactcg cgcgcgcatc ctcccgccag cctgcccgcc tgctcgccgg 61 cgcccggagc ccgctctggc cgctggatga tctgaagctg ccctctctcc ttcatttata 121 tcaccagctt gctttttgct gagaaagctt cctgccctgg aagatggcac ccttccccat 181 ccagacacct tgggaatgaa ttatgaggga gccaggagtg agagagagaa ccacgctgct 241 gatgactccg agggaggggc cctggacatg tgctgcagtg agaggctacc gggtctcccc 301 cagccgatag tgatggaggc actggacgag gctgaagggc tccaggactc acagagagag 361 atgccgccac cccctcctcc ctcgccgccc tcagatccag ctcagaagcc accacctcga 421 ggcgctggga gccactccct cactgtcagg agcagcctgt gcctgttcgc tgcctcacag 481 ttcctgcttg cctgtggggt gctctggttc agcggttatg gccacatctg gtcacagaac 541 gccacaaacc tcgtctcctc tttgctgacg ctcctgaaac agctggaacc cacggcctgg 601 cttgactctg ggacgtgggg agtccccagt ctgctgctgg tctttctgtc cgtgggcctg 661 gtcctcgtta ccaccctggt gtggcacctc ctgaggacac ccccagagcc acccacccca 721 ctgccccctg aggacaggcg ccagtcagtg agccgccagc cctccttcac ctactcagag 781 tggatggagg agaagatcga ggatgacttc ctggacctcg acccggtgcc cgagactcct 841 gtgtttgatt gtgtgatgga catcaagcct gaggctgacc ccacctcact caccgtcaag 901 tccatgggtc tgcaggagag gaggggttcc aatgtctccc tgaccctgga catgtgcact 961 ccgggctgca acgaggaggg ctttggctat ctcatgtccc cacgtgagga gtccgcccgc 1021 gagtacctgc tcagcgcctc ccgtgtcctc caagcagaag agcttcatga aaaggccctg 1081 gaccctttcc tgctgcaggc ggaattcttt gaaatcccca tgaactttgt ggatccgaaa 1141 gagtacgaca tccctgggct ggtgcggaag aaccggtaca aaaccatact tcccaaccct 1201 cacagcagag tgtgtctgac ctcaccagac cctgacgacc ctctgagttc ctacatcaat 1261 gccaactaca tccggggcta tggtggggag gagaaggtgt acatcgccac tcagggaccc 1321 atcgtcagca cggtcgccga cttctggcgc atggtgtggc aggagcacac gcccatcatt 1381 gtcatgatca ccaacatcga ggagatgaac gagaaatgca ccgagtattg gccggaggag 1441 caggtggcgt acgacggtgt tgagatcact gtgcagaaag tcattcacac ggaggattac 1501 cggctgcgac tcatctccct caagagtggg actgaggagc gaggcctgaa gcattactgg 1561 ttcacatcct ggcccgacca gaagacccca gaccgggccc ccccactcct gcacctggtg 1621 cgggaggtgg aggaggcagc ccagcaggag gggccccact gtgcccccat catcgtccac 1681 tgcagtgcag ggattgggag gaccggctgc ttcattgcca ccagcatctg ctgccagcag 1741 ctgcggcagg agggtgtagt ggacatcctg aagaccacgt gccagctccg tcaggacagg 1801 ggcggcatga tccagacatg cgagcagtac cagtttgtgc accacgtcat gagcctctac 1861 gaaaagcagc tgtcccacca gtccccagaa tgactgcgct tctcctacaa ggttctctgg 1921 gcactgccca gcctgagtct cggccctcac ccagggccct gcctcgggtc ctgggcctgc 1981 tccccgcttc ctccccttca gtcagctccc tctgtcctct gtcagcctgg cctgacccct 2041 accctccagc attgctcttc ctactgtaca tattggggag tggggggcag ggtcgggaag 2101 ggacatgcca ggccaggcct ggggccccgg ggcctgaccc acaccacgca gaccccgggc 2161 tccagttttt aacgatggtt ccatcaatac ctgatccaga atgtttccgt gctacacttt 2221 gtgtcctgct gcaatgtgtt ctgtctgtcc atccatctct gccctctgta ccggacactg 2281 tgtctcctca gccaggaagg ggtaatgagc tccagcccct aagcaaccgg acttgcctgc 2341 ctcggcctca cccgcacttc tcccaaaagg cagatgacgg ggagttaggc atggggagct 2401 ccagaaggtc accagagagc tttcagctga gggagagttc tctaggttgg agtgggcatc 2461 acagccaggg tggcctctgg gtgtcagatg ctctcaggag ggtgcccagc ctgtgaggca 2521 ctggcaaggt agggggcaga tggggcatgg agaacccaga ggatctaggc cctgttgggg 2581 aggggagggg agctcaaggt ttgggtgggg actcagccca gatctacgtg agacattttt 2641 ctgtgtcact gtgggaaagc cttcccagaa gtctcactgc gtgttgctct gcgtgtgttc 2701 ccatgtccat gcgtgtgttg agagcccatc aggagggcat gcatgactct ttggcaacat 2761 gtattatctt ggagccacgt gtttttattg ctgactttaa atatttatcc cacggcagac 2821 agagacattt ggtgtctttt tataattcgc tcgtggtcat tgaatagagc aataaacgga 2881 gcattttgag caaaactaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2941 aaaaaaa //