LOCUS BC064590 1876 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Yip1 domain family, member 1, mRNA (cDNA clone
MGC:74637 IMAGE:5749036), complete cds.
ACCESSION BC064590
VERSION BC064590.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1876)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1876)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40538797.
FEATURES Location/Qualifiers
source 1..1876
/db_xref="H-InvDB:HIT000261509"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74637 IMAGE:5749036"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1876
/gene="YIPF1"
/gene_synonym="DJ167A19.1"
/gene_synonym="FinGER1"
/db_xref="GeneID:54432"
/db_xref="HGNC:HGNC:25231"
CDS 338..1258
/gene="YIPF1"
/gene_synonym="DJ167A19.1"
/gene_synonym="FinGER1"
/codon_start=1
/product="Yip1 domain family, member 1"
/protein_id="AAH64590.1"
/db_xref="GeneID:54432"
/db_xref="HGNC:HGNC:25231"
/translation="MAAVDDLQFEEFGNAATSLTANPDATTVNIEDPGETPKHQPGSP
RGSGREEDDELLGNDDSDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLL
PIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRK
VSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAIL
WIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGC
LAYFFDAPEMDHLPTTTATPNQTVAAAKSS"
BASE COUNT 542 a 457 c 404 g 473 t
ORIGIN
1 ccgaaaccgg cgcggagcaa ctgaggcccg agccttctcg ggacccgggg gacgcctaac
61 cccgcgagat gaggaaactg aggccgcgag gagcgcgcac acagcagaga agcagcagaa
121 tcgggaatca aacccagctc tgtctgaccc cagagcctgt gcccttaacc actggctagg
181 ctgaactgcc tttgttcttc actgtcccca tcacctcttt caaacctcag cctctccttc
241 ctcatcgtta catctctagg ctgcacctgg tctctaaaca ttcacacaac ccctgcaaat
301 tttcttcctc ataattggga gaagactcac tggccgaatg gcagcagtag atgacttgca
361 atttgaagaa tttggcaatg cagccacttc tctgacagca aacccagatg ccaccacagt
421 aaacattgag gatcctggtg aaaccccaaa acatcagcca ggatccccaa gaggctcagg
481 aagagaagaa gatgatgagt tactgggaaa tgatgactct gacaaaactg agttacttgc
541 tggacagaag aaaagctccc ccttctggac atttgaatac taccaaacat tctttgatgt
601 ggacacctac caggtctttg acagaattaa aggatctctt ttgccaatac ccgggaaaaa
661 ctttgtgagg ttatatatcc gcagcaatcc agatctctat ggcccctttt ggatatgtgc
721 cacgttggtc tttgccatag caattagtgg gaatctttcc aacttcttga tccatctggg
781 agagaagacg taccattatg tgcccgaatt ccgaaaagtg tccatagcag ctaccatcat
841 ctatgcctat gcctggctgg ttcctcttgc actctggggt ttcctcatgt ggagaaacag
901 caaagttatg aacatcgtct cctattcatt tctggagatt gtgtgtgtct atggatattc
961 cctcttcatt tatatcccca ccgcaatact gtggattatc ccccagaaag ctgttcgttg
1021 gattctagtc atgattgccc tgggcatctc aggatctctc ttggcaatga cattttggcc
1081 agctgttcgt gaggataacc gacgcgttgc attggccaca attgtgacaa ttgtgttgct
1141 ccatatgctg ctttctgtgg gctgcttggc atactttttt gatgcaccag agatggacca
1201 tctcccaaca actacagcta ctccaaacca aacagttgct gcagccaagt ccagctaatg
1261 aggaaattct cttttgtttt ttggagcatg gttctttggg aagtggcatc cactgcagga
1321 aagcagaatg agcagagcca gcagaactga tggagtggca caaattccca gtgtctggat
1381 ggtgccacac tggcgcctaa tcacccgttt aacaagcaga aattaaatgt tgctcagcac
1441 atgtgtcttt cagctcttcc ttttcaccca tggatgatca ttgcgagcat gcgctgattg
1501 gactgaaatg ccggggaata ggttaggcat gctcagtgcc gtccctttgc caccacagtc
1561 aaatgacatg cttcactgtg gtaccttaat acctgaaata gaaccatgga aaattctgat
1621 gtcctctctc tgaattatgt acagactacc tgggggatcc tcttctctcc aaatgttagc
1681 catcctgaag tagccgaaca gtagaaactt tggtggggat taactgggag cttgaaaatt
1741 tgtctttggt aacctgatac tggacagctg aactgaatgg ctgcaaaata aatacctcac
1801 atgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaa
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