LOCUS BC064561 1463 bp mRNA linear HUM 06-JAN-2004 DEFINITION Homo sapiens suppressor of Ty 16 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:5582418), partial cds. ACCESSION BC064561 VERSION BC064561.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1463) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1463) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 139 Row: d Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19924176. FEATURES Location/Qualifiers source 1..1463 /db_xref="H-InvDB:HIT000261480" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5582418" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>1463 /gene="SUPT16H" /gene_synonym="CDC68" /gene_synonym="FACT" /gene_synonym="FACTP140" /gene_synonym="FLJ10857" /gene_synonym="FLJ14010" /gene_synonym="SPT16/CDC68" /db_xref="GeneID:11198" /db_xref="MIM:605012" CDS 65..>1463 /gene="SUPT16H" /gene_synonym="CDC68" /gene_synonym="FACT" /gene_synonym="FACTP140" /gene_synonym="FLJ10857" /gene_synonym="FLJ14010" /gene_synonym="SPT16/CDC68" /codon_start=1 /product="SUPT16H protein" /protein_id="AAH64561.1" /db_xref="GeneID:11198" /db_xref="MIM:605012" /translation="MAVTLDKDAYYRRVKRLYSNWRKGEDEYANVDAIVVSVGVDEEI VYAKSTALQTWLFGYELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPA ITLLIREKNESNKSSFDKMIEAIKESKNGKKIGVFSKDKFPGEFMKSWNDCLNKEGFD KIDISAVVAYTIAVKEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLA ESVEKAIEEKKYLAGADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGAITCAMG IRFKSYCSNLVRTLMVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVK KQKPELLNKITKNLGFGMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGK KPEEKTYALFIGDTVLVDEDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDL LGRGSRAALLTEKKKK" misc_feature 581..1342 /gene="SUPT16H" /gene_synonym="CDC68" /gene_synonym="FACT" /gene_synonym="FACTP140" /gene_synonym="FLJ10857" /gene_synonym="FLJ14010" /gene_synonym="SPT16/CDC68" /note="Peptidase_M24; Region: metallopeptidase family M24" /db_xref="CDD:pfam00557" BASE COUNT 483 a 254 c 378 g 348 t ORIGIN 1 gcgggtggct gagccgggac ctcgcgtgat tctcggaacc cgaggagaag cggcgtccgg 61 ggctatggct gtgactctgg acaaagacgc ttattatcgg cgagtgaaga gactgtacag 121 caattggcgg aaaggagaag atgagtatgc caacgttgat gccattgttg tatcagtggg 181 tgttgatgaa gaaattgttt atgccaaatc aactgcctta cagacatggc tctttggtta 241 tgaactaact gatactatca tggtcttttg tgatgacaaa atcatcttta tggccagcaa 301 gaaaaaagtg gagttcttga aacagattgc caacactaag ggcaatgaga atgctaatgg 361 agcccctgcc atcacactgc taatacgaga aaagaatgaa agtaataaga gtagctttga 421 caaaatgatt gaagccatta aagaaagcaa gaatggcaag aagattggag tgttcagcaa 481 agacaaattc cctggagagt tcatgaagag ctggaatgac tgcctcaaca aagaaggctt 541 tgacaaaata gatatcagtg cagttgtggc atataccatc gctgtaaagg aggatgggga 601 gctcaaccta atgaagaaag cagccagcat cacttctgaa gtcttcaaca aattcttcaa 661 ggaaagagtc atggaaatag ttgatgcaga tgagaaagtt cgacacagca aactggctga 721 gtctgtggaa aaggccattg aagagaaaaa ataccttgct ggggcagacc cttctactgt 781 ggaaatgtgt taccctccta tcattcagag tggtggcaac tataatctca agttcagtgt 841 ggtgagtgac aagaatcata tgcactttgg ggctatcact tgtgccatgg gtattcgctt 901 caagtcttac tgctccaacc ttgttcgcac tttgatggtt gatccttctc aagaagttca 961 agaaaattat aactttttgc tccagcttca agaggagctg ctgaaggaat taagacatgg 1021 tgtgaagata tgtgacgtgt ataacgctgt catggacgtg gttaaaaagc agaagccaga 1081 actgctgaac aaaattacca aaaacctagg gtttgggatg ggaattgaat tccgtgaagg 1141 ctccctagta atcaatagca aaaatcaata caaactgaag aaaggaatgg ttttcagcat 1201 caatttagga ttctcagacc tgactaacaa ggaggggaaa aagccagaag agaaaaccta 1261 tgccctgttc attggtgaca cagtgcttgt ggatgaggat ggcccagcta ctgttctcac 1321 ttctgtgaag aagaaagtga agaatgtggg gattttccta aagaatgaag atgaggaaga 1381 agaggaggag gagaaagatg aggcagagga ccttttggga agaggttctc gggcagcatt 1441 acttacagaa aaaaaaaaaa aaa //