LOCUS BC064559 4354 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 2 open reading frame 3, mRNA (cDNA clone
MGC:75039 IMAGE:5548897), complete cds.
ACCESSION BC064559
VERSION BC064559.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4354)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4354)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44890064.
FEATURES Location/Qualifiers
source 1..4354
/db_xref="H-InvDB:HIT000261478"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75039 IMAGE:5548897"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4354
/gene="C2orf3"
/gene_synonym="DNABF"
/gene_synonym="GCF"
/db_xref="GeneID:6936"
/db_xref="HGNC:HGNC:1317"
/db_xref="MIM:189901"
CDS 28..2373
/gene="C2orf3"
/gene_synonym="DNABF"
/gene_synonym="GCF"
/codon_start=1
/product="chromosome 2 open reading frame 3"
/protein_id="AAH64559.1"
/db_xref="GeneID:6936"
/db_xref="HGNC:HGNC:1317"
/db_xref="MIM:189901"
/translation="MAHRPKRTFRQRAADSSDSDGAEESPAEPGAARELPVPGSAEEE
PPSGGGRAQVAGLPHRVRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDK
IHHSSESKDDQGLSSDSSSSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLD
VQHTSSISGMKRESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQ
EDEKQDTWEQQQMRKAVKIIEERDIDLSCGNGSSKVKKFDTSISFPPVNLEIIKKQLN
TRLTLLQETHRSHLREYEKYVQDVKSSKSTIQNLESSSNQALNCKFYKSMKIYVENLI
DCLNEKIINIQEIESSMHALLLKQAMTFMKRRQDELKHESTYLQQLSRKDETSTSGNF
SVDEKTQWILEEIESRRTKRRQARVLSGNCNHQEGTSSDDELPSAEMIDFQKSQGDIL
QKQKKVFEEVQDDFCNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLID
WNPLKLESTGLKEMPWFKSVEEFMDSSVEDSKKESSSDKKVLSAIINKTIIPRLTDFV
EFLWDPLSTSQTTSLITHCRVILEEHSTCENEVSKSRQDLLKSIVSRMKKAVEDDVFI
PLYPKSAVENKTSPHSKFQERQFWSGLKLFRNILLWNGLLTDDTLQELGLGKLLNRYL
IIALLNATPGPDVVKKCNQVAACLPEKWFENSAMRTSIPQLENFIQFLLQSAHKLSRS
EFRDEVEEIILILVKIKALNQAESFIGEHHLDHLKSLIKED"
BASE COUNT 1401 a 787 c 850 g 1316 t
ORIGIN
1 agggcgccgg gcgctcgggc ctcggccatg gctcacaggc cgaaaaggac ttttcggcag
61 cgcgcggctg attccagcga cagcgatggc gccgaggagt cgcctgctga gcctggggcg
121 gcgagggaac ttccggtccc gggttctgcg gaggaagagc cgccctctgg aggaggccgc
181 gcgcaggtgg cgggactgcc ccaccgggtt cggggccctc gtggccgggg ccgggtctgg
241 gcgagctccc ggcgtgccac caaagcggct ccccgcgcgg acgaaggctc agaatccaga
301 acccttgatg tgtccacaga tgaagaggat aaaatacatc actcctcaga aagtaaggat
361 gatcagggtt tgtcttctga cagttctagc tctcttggag aaaaagaact ttcatcaaca
421 gttaagatcc cagatgcagc ttttattcag gcagcccgca gaaaacgtga attggccagg
481 gcccaagatg actatatttc tttggatgta caacatacct cctccatctc tggtatgaag
541 agagagagcg aagatgaccc tgagagtgag cctgatgacc atgaaaagag aataccattt
601 actctaagac ctcaaacact tagacaaagg atggctgagg aatcaataag cagaaatgaa
661 gaaacaagtg aagaaagtca ggaagatgaa aagcaagata cttgggaaca acagcaaatg
721 aggaaagcag ttaaaatcat agaggaaaga gacatagatc tttcctgtgg caatggatct
781 tcaaaagtga agaaatttga tacttccatt tcatttccgc cagtaaattt agaaattata
841 aagaagcaat taaatactag attaacatta ctacaggaaa ctcaccgctc acacctgagg
901 gagtatgaaa aatacgtaca agatgtcaaa agctcaaaga gtaccatcca gaacctagag
961 agttcatcaa atcaagctct aaattgtaaa ttctataaaa gcatgaaaat ttatgtggaa
1021 aatttaattg actgccttaa tgaaaagatt atcaacatcc aagaaataga atcatccatg
1081 catgcactcc ttttaaaaca agctatgacc tttatgaaac gcaggcaaga tgaattaaaa
1141 catgaatcaa cgtatttaca acagttatca cgcaaagatg agacatccac aagtggaaac
1201 ttctcagtag atgaaaaaac tcagtggatt ttagaagaga ttgaatctcg aaggacaaaa
1261 agaagacaag caagggtgct ttctgggaat tgtaaccatc aggaaggaac atctagtgat
1321 gatgaactgc cttcagcaga gatgattgac ttccaaaaaa gccaaggtga cattttacag
1381 aaacagaaga aagtttttga agaagtgcaa gatgattttt gtaacatcca gaatattttg
1441 ttgaaatttc agcaatggcg agaaaagttt cctgactcct attatgaagc tttcattagt
1501 ttatgcatac caaagctttt aaatccccta atacgagttc agttgattga ttggaatcct
1561 cttaagttgg aatccacagg tttaaaagag atgccatggt tcaaatctgt agaagaattt
1621 atggatagca gtgtagaaga ttcaaagaag gaaagtagtt cagataaaaa agtcttgtct
1681 gcaatcatca acaaaacaat tattccccga cttacagact ttgtagaatt cctttgggat
1741 cctttgtcaa cctcacagac aacaagttta ataacacatt gcagagtgat tcttgaagaa
1801 cattccactt gtgaaaatga agttagtaaa agcagacagg atttacttaa atccattgtt
1861 tcaagaatga aaaaggcagt agaagatgat gtttttattc ctctgtatcc aaagagtgct
1921 gtagaaaaca aaacatcacc tcattcaaag ttccaagaaa gacagttctg gtcaggccta
1981 aagctcttcc gcaatattct tctttggaat ggactcctta cagatgacac cttgcaagaa
2041 ctaggactag ggaagctgct aaatcgttac cttattatag cacttctcaa tgccacacct
2101 gggccagatg tggttaaaaa gtgcaaccag gtagcagcat gtctaccaga aaaatggttt
2161 gaaaattctg ccatgaggac atctattcca cagctagaaa acttcattca gtttttattg
2221 cagtctgcac ataaattatc tagaagtgaa ttcagggatg aagtcgaaga aataattctt
2281 attttggtga aaataaaagc tttgaatcaa gcagaatcct tcataggaga gcatcaccta
2341 gaccatctta aatcactaat taaagaagat tgaataaact ttattggaaa atgctaaaat
2401 tttaatatag ttacactcag ttcctttgtt tgagaagaag ctggtgcctc tctcttcttt
2461 attccctgta atagaaggta ggatttgaaa aaaagcagga ctccacctct gtattccccc
2521 gtgctttacc ttctggcatc atgaaaagct gccatgattc tgtggtgttc taaggaatta
2581 aatgcactgg agctttaaga gctcaacgtg tttccctttg attcttttgg ctggtctttc
2641 aattttctta agaggggaac tggagaaacc ttgctaaagg ttttagctta agtgagcatg
2701 ctactaagtc ttctgtcctg aaccacaata atatctttta gttctcttta actaccttta
2761 tttaaaaata agtcaatatg aaaatctcag ttggagtgaa ttatttgcta agtattaaat
2821 gattaaggca tgtgccgatt gtcaaattat ccttcagaaa tctgtaccaa tttaatgtac
2881 caacataagc ataagtgagt gccaatgaat ccctaccagc agtagttatt atccttttta
2941 aaaatgcatt gaaaatttga aaggtaaaaa tcttatttta atagcgtatt ttgtgttggc
3001 tattagagag taaacatatt ggttttggcc atttgtaatt atttctgaaa tatccatctt
3061 tttcttatgg actttaagac ctttatattt ttaaagatat tgattttttg cccatgcttg
3121 tggcagaagt tttccttatt tgccattttt cttttatttt ttttttaatt gtattttttg
3181 agacagggtc tggctctgtc acccaggctg gagagtagtg gcacaatctc ggctcactgc
3241 aacctctgcc ttctgggctc aagcaatcct cccacttcaa cctcccaagt agctgggact
3301 ataggcatgc gccaccatgc ccagctgatt tttgtatttt tttgtagaga tggggtttcg
3361 tgacattgcc caggctggtc tcgaactctt gagctcaagc agtctaccca ccttgacctc
3421 ccaaagtgct gggattacag gcttgagcaa ccatgtttgg cctttctttt aaatttgttg
3481 atgttttttg aagcattaag tcattactta ttagcaagtt actattttgt ttttttgtca
3541 ttggtggtag gactaagaag gaaacagata ttttaaatac tcacaacatg tgattcattt
3601 tctgataaaa tatttgtcta ataagacaga ggcaagataa tttaatcaaa agaaattaag
3661 aaaattttcc aaaaatgtta gtttactagt aatttttcta agtctactta ttaaataact
3721 taagggaaac tgtaaatata ttttgcaaat tgttgtccaa aagataattg gaaaaaattg
3781 aatatattgt aggatttgaa tatacagcct acttttatgt cacctctacc ttcaaaacta
3841 catataattt attttaggag ttggatttgt tatgtctgtt gcagtgagga cttgtgattc
3901 actggtatga agaatttttt gatgtttata ttagtaacaa aattatacaa ggatagaatc
3961 tcatctagaa aatgcaaact attgttgaaa agcagttagc atttccacac aaccgctgtc
4021 cccagagata actgctgttt tcattttaat gttatccttt tagacctttt ctctatttac
4081 aaaaatgtta cgtgtttcta tgtgtacata gttttgggtt tttttttttt ttttttacgt
4141 aagtggcaga cactttattg cacatgaaat ttgtaatttt tttctattta agtacacatt
4201 tggaaattat cctctgactt ttggattttt aactaaatat gttggacgtg ttcctttata
4261 tatttaagtt cagcacagaa actttcctac ctttttgtgg aagataaaat attaaaactg
4321 ctttcaaaac tacaaaaaaa aaaaaaaaaa aaaa
//