LOCUS BC064528 3961 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens coiled-coil domain containing 21, mRNA (cDNA clone
MGC:74928 IMAGE:5585742), complete cds.
ACCESSION BC064528
VERSION BC064528.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3961)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3961)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40538793.
FEATURES Location/Qualifiers
source 1..3961
/db_xref="H-InvDB:HIT000261447"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74928 IMAGE:5585742"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3961
/gene="CCDC21"
/gene_synonym="DKFZP434L0117"
/gene_synonym="DKFZp434P232"
/gene_synonym="FLJ13976"
/gene_synonym="FLJ22000"
/db_xref="GeneID:64793"
/db_xref="HGNC:HGNC:25309"
CDS 132..2420
/gene="CCDC21"
/gene_synonym="DKFZP434L0117"
/gene_synonym="DKFZp434P232"
/gene_synonym="FLJ13976"
/gene_synonym="FLJ22000"
/codon_start=1
/product="coiled-coil domain containing 21"
/protein_id="AAH64528.1"
/db_xref="GeneID:64793"
/db_xref="HGNC:HGNC:25309"
/translation="MAMQEKYPTEGISHVTSPSSDVIQKGSSLGTEWQTPVISEPFRS
RFSRCSSVADSGDTAIGTSCSDIAEDFCSSSGSPPFQPIKSHVTIPTAHVMPSTLGTS
PAKPNSTPVGPSSSKLPLSGLAESVGMTRNGDLGAMKHSPGLSRDLMYFSGATGENGI
EQSWFPAVGHERQEEARKFDIPSMESTLNQSAMMETLYSDPHHRVRFHNPRTSTSKEL
YRVLPEAKKAPGSGAVFERNGPHSNSSGVLPLGLQPAPGLSKPLPSQVWQPSPDTWHP
REQSCELSTCRQQLELIRLQMEQMQLQNGAICHHPAAFGPSLPILEPAQWISILNSNE
HLLKEKELLIDKQRKHISQLEQKVRESELQVHSALLGRPAPFGDVCLLRLQELQRENT
FLRAQFAQKTEALSREKIDLEKKLSASEVEVQLIRESLKVALQKHSEEVKKQEERVKG
RDKHINNLKKKCQKESEQNREKQQRIETLERYLADLPTLEDHQKQSQQLKDSELKSTE
LQEKVTELESLLEETQAICREKEIQLESLRQREAEFSSAGHSLQDKQSVEETSGEGPE
VEMESWQKRYDSLQKIVEKQQQKMDQLRSQVQSLEQEVAQEEGTSQALREEAQRRDSA
LQQLRTAVKELSVQNQDLIEKNLTLQEHLRQAQPGSPPSPDTAQLALELHQELASCLQ
DLQAVCSIVTQRAQGHDPNLSLLLGIHSAQHPETQLDLQKPDVIKRKLEEVQQLRRDI
EDLRTTMSDRYAQDMGENCVTQ"
BASE COUNT 989 a 997 c 1031 g 944 t
ORIGIN
1 gcaacggccg ttagaggagc tgagggaggg aaccaccgct caccgcagac gtggtggctg
61 cagtcagtct tcccgagtga gggatttcgc cgcccgcttt caggcccgtt tggcttaaat
121 aactgtgatt gatggccatg caggagaaat atccaactga ggggatctct cacgtcactt
181 caccgagttc cgatgtgatt cagaagggca gttccctggg gactgaatgg cagaccccag
241 ttatctcgga gccctttcgg agccgcttca gccgctgttc aagtgtagcc gacagtgggg
301 acacagccat tggtacatca tgctcagata ttgcggagga tttttgcagc tcaagtggca
361 gtcctccttt ccagcccatc aaaagccacg taaccattcc aacagcccat gtgatgcctt
421 ctactttagg gacctctcct gccaagccaa attctacacc tgttggaccc tcttcctcta
481 aactcccttt gtcagggttg gctgaaagtg tgggaatgac aagaaatgga gacctcggtg
541 caatgaaaca ttctccaggc ctatctagag atctcatgta tttctctggt gctactggag
601 aaaatggaat tgagcagtcc tggtttccag cagtgggcca tgaaagacaa gaagaggcga
661 ggaagtttga tattcctagc atggaatcta ccctcaatca gtcggcaatg atggagacac
721 tttattcaga tcctcaccac cgagtccgct tccacaaccc aagaaccagc acaagtaagg
781 agttgtacag agtgttgcct gaggccaaga aggcaccggg cagcggggca gtgtttgagc
841 ggaatggacc acattctaat agcagtgggg tcctcccttt gggactccag cctgctcccg
901 ggctctccaa gcctctgccc tctcaggtgt ggcagccgag tcctgacact tggcatcccc
961 gagagcaatc ttgtgaactc agcacttgtc ggcagcagct ggaattgatt cgtttacaga
1021 tggagcaaat gcagcttcag aatggagcca tctgccacca tcctgctgct tttggtcctt
1081 cactgcccat cttagagcca gcacagtgga tcagcatctt gaacagtaat gaacaccttc
1141 tgaaggaaaa agagcttctc attgacaagc agaggaaaca catctctcag ctggagcaga
1201 aagtgcgaga gagcgaactg caagtccaca gtgccctctt gggccgccct gccccctttg
1261 gtgatgtctg cttgctgagg ctacaggaat tgcagcgaga aaacactttc ttacgtgcac
1321 agtttgcaca gaagacagaa gccttgagca gagaaaagat tgaccttgaa aagaaactct
1381 ctgcttctga agttgaagtc cagctcatca gagagtcgct caaagtggcg ttgcagaagc
1441 attctgagga agtgaagaaa caggaagaaa gggtcaaagg tcgtgataaa catatcaata
1501 atttgaaaaa gaaatgccag aaggaatcag agcagaaccg ggagaagcag cagcgtattg
1561 agaccttgga gcgctacctg gctgacctgc ccacactgga agaccatcag aagcagagcc
1621 agcagcttaa ggattctgag ttgaagagca cagagctgca ggagaaagtg actgagctgg
1681 agagtttgct ggaggagacc caggcaatct gcagagagaa ggagattcaa ctggaaagcc
1741 tgaggcagag agaagcagaa ttctcctccg ctggacatag cctgcaagat aaacagtctg
1801 tggaggagac cagtggagaa ggtccagaag tggaaatgga gtcctggcag aagcgatacg
1861 attcgctcca aaagattgtg gagaagcagc agcagaagat ggatcagttg cgctcacaag
1921 tacagagcct agagcaggaa gtggctcaag aagaaggaac aagccaggcc ctgagagagg
1981 aggcccagcg aagggattca gccctgcagc agctgcgcac agccgtgaag gagctttcag
2041 tgcaaaacca ggacttgatt gagaagaatc tgacactcca ggaacacctg cgccaggccc
2101 aaccagggtc tccaccttca ccagacacgg cccagctggc acttgagctg caccaggagt
2161 tggccagttg ccttcaagat ctgcaggctg tctgtagcat tgtgacccag agggcccagg
2221 gccatgaccc caatctctcc ctgctcctgg gcattcactc agcacagcac ccagagactc
2281 agctagattt gcagaagcca gatgtgatca agaggaaact agaagaggtt caacagctgc
2341 gtcgtgacat tgaggactta aggaccacca tgtcagacag atatgcccag gacatgggag
2401 aaaactgtgt cacacagtga ggaattctgg gggattcccc cagggaggag ctgggctgct
2461 gagagcctag tccagcaggt ttctgccctg acattctctt gtctgctatt cccagagagg
2521 tctcagaggg gaggggagag cctgcatctg ggggccaagg gctgattagg gaactgtgtc
2581 ctacccacac tggcatgttg gattacgttt gtcctgttaa ttcactctcg acggtgagtt
2641 actaattaac ttttggcagg tacaacagat aagtcctcac aaactgttcc cagccctagg
2701 ctgacatgag agacgaacag gctgtccacc tttcttctcc atccaatggg atggatccat
2761 gttcattccc acttcacacc ttggtcctgc tgattagaga gctcatcaga ggggcctgga
2821 aaggctgagc aagtaccagt gacaatggcc atttaagaat tctcaggccc catgtgccag
2881 ccttcttggg aactgagctg gctttctggg ttttctcatg cctggtctta ctgcttcttc
2941 ctcagggctc ttgttctccc agaagcctca gggtaatgtg ttggttagca cgtaactact
3001 aggattgggg ccctagggat tatagccagg actctaatct gcctaccatg ccatttaaca
3061 agagatccca ctctccagct gccttgtgtc cctagggtcc tggccatgtg tttagtgtgc
3121 taaactttct cctttgttct caggccttcc aggtagtccc cttcctggac ttaagagtgc
3181 aaactcttct ctgtggttct agccttgggc agaattatat cccagagacc acagagcaac
3241 tgtcaagctg cttaccccct cacccagggc tacagcctgt gcccagccct ctaatttgtg
3301 cctctcttgt gttgggggtg gtgggggtta ttcctttccc tttcctgctc tggcctcctt
3361 gaaagttcag agtacccagt acaagtcagc tttaaagtac agcttttagt gtttcctggg
3421 ttgtttctct ggggctttag tgagggacct ttgccctctg gtttttcttg cctcctggtt
3481 tagggagcat ctcacacttg ttagtatctg gttgttgggc cagccgtgcc tcctctagat
3541 ctggagccag gccaggcagg ggccacgtgt gggccagtca gccactacaa gatttttgct
3601 aagctttggg ctgttggcag catcttggac ctcatgcctg ggcctgaatg aggctctttc
3661 ttaagtgttt ttacaagttt gtgttttatt tatggagtga cttatccctt ccattcagag
3721 cagccccacc cagccagccc ttcagcctct gggctcctgc tgcttaaagg cagagccgcc
3781 tggttggtct ccaccctgtg cattgggagc ccagccacca tgctgacggg tatttttcct
3841 cataaagttt ataaccagtt atttatatga atctttgtta tgtccatttg tttgtattgc
3901 gtattttgat tataaaataa agtatcttaa cagacaaaaa aaaaaaaaaa aaaaaaaaaa
3961 a
//