LOCUS BC064512 2518 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens ubiquitin protein ligase E3 component n-recognin 2,
mRNA (cDNA clone IMAGE:3836601), complete cds.
ACCESSION BC064512
VERSION BC064512.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2518)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2518)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27597060
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2518
/db_xref="H-InvDB:HIT000261431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3836601"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2518
/gene="UBR2"
/gene_synonym="bA49A4.1"
/gene_synonym="C6orf133"
/gene_synonym="dJ242G1.1"
/gene_synonym="dJ392M17.3"
/gene_synonym="KIAA0349"
/db_xref="GeneID:23304"
/db_xref="MIM:609134"
CDS 278..1597
/gene="UBR2"
/gene_synonym="bA49A4.1"
/gene_synonym="C6orf133"
/gene_synonym="dJ242G1.1"
/gene_synonym="dJ392M17.3"
/gene_synonym="KIAA0349"
/codon_start=1
/product="UBR2 protein"
/protein_id="AAH64512.1"
/db_xref="GeneID:23304"
/db_xref="MIM:609134"
/translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAH
YVPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRV
FKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEG
PYCQKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADL
EMVEKSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGD
FQYCEQAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRI
LCQVGLQEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRF
AKNYERLQSDYVTDDHDREFSVADLSVQIFTVPSLFSISAGRSGSPL"
BASE COUNT 715 a 485 c 602 g 716 t
ORIGIN
1 gagtgtcagg cctggggttt tctgtgtcct tccctgggtc agggacgagc cagtgacttg
61 actcttgggc gctaagcttg ggagggagcg caggaggccg ctgtccttcc tttccggttc
121 acgtcaccct tctctccctc tgttgctcca cctgcagcca cttggacggc tccgggactg
181 attgcctggg gcaggggtgg cagtcgaggc cgccggggcc gaggtgaggc tgcagctctc
241 cgggcggcgg tagcgctggg gaggaggagg agagaagatg gcgtcggagc tagagccaga
301 ggtgcaggcc atcgaccgga gcttgctgga atgttcggcc gaggagattg cggggaaatg
361 gctgcaagca actgacctca ctagagaagt gtaccagcat ttagcccact atgtacccaa
421 aatctactgc aggggtccca acccttttcc acagaaagaa gacatgctgg cacagcatgt
481 tttgttggga ccaatggaat ggtacctttg tggtgaagat cctgcatttg gatttccaaa
541 acttgagcaa gcaaacaaac cttctcatct ttgtggtcgt gtttttaaag taggagagcc
601 tacatattct tgcagagact gtgcagttga tccaacttgt gttttgtgca tggagtgctt
661 tttgggaagt attcacagag atcatcgata taggatgaca acatcaggag gtggaggttt
721 ctgtgactgt ggtgatactg aagcctggaa agagggtcct tactgtcaaa aacatgaact
781 taacacctct gaaattgagg aagaagagga tcctcttgtt catttatcag aagatgtgat
841 agcaagaact tataacattt ttgctattac gtttcggtat gcagtagaaa tattaacctg
901 ggaaaaagaa agtgaattgc cagcagattt agagatggta gagaagagtg acacctacta
961 ttgcatgctg tttaatgatg aggttcacac ctacgaacaa gttatttata ctcttcagaa
1021 agctgttaac tgtacacaaa aagaagctat tggttttgca actacagtag atcgagatgg
1081 gcgtaggtct gttcgatatg gagattttca gtattgtgag caagcaaaat cagtaattgt
1141 gagaaatacc agtagacaga caaagccact caaagttcaa gttatgcatt cgtctattgt
1201 cgcacatcag aattttggtt tgaaactttt gtcttggctg ggaagtatta ttggatattc
1261 agatggcctt cgccggattt tatgtcaagt tggtttacaa gaagggccag atggtgaaaa
1321 ctcttctcta gtggacagac tgatgcttag tgattccaaa ttatggaaag gtgctaggag
1381 tgtatatcat cagttgttca tgagcagtct gcttatggat ttgaaataca agaaactatt
1441 tgctgttcga tttgcaaaaa actatgagcg tttgcagagt gattatgtga cagatgacca
1501 cgacagagag ttttcagtcg cagacctctc ggttcagata ttcacggttc cttcactttt
1561 ctctatctct gctgggcgca gtggctcacc tctgtaatcc tagccaaggc aggtggatca
1621 cctgagctta ggagtctgag accagcctgg ccaacatggt gaaaccccat ctctactaaa
1681 aatagaaaaa ttagccaggc gtggtggcgc acgcctgagg ctgaggcaga agaatcactt
1741 gaacccagga ggcggaggtt gcagtgagct gagatcaagc cattgcactc cagcctgggc
1801 gacagagcga gattcggtat ccaaaaaaaa aaagttcttg ctctgtcact caggctggag
1861 tgaggtggca cgatcacagc tcactgcagc tttgaccacc tgggcttagg caatcctcct
1921 gtctcagcct cccaagtagc tgggaccaca gatgcatgcc accacaccca gctagtctta
1981 acatttttaa attaagctta tatggtttat atttttgatg ctgtagtaaa ctttttatat
2041 ttttgatgct gtagtaaact ttttatattt ttaaacaggc tatggtagta tttaggaaaa
2101 ctactgattt ttatatgtcc atcttatatc tgtctggtct atctggatat gtatgtattc
2161 agattaaata ggttctacca gactcttttc cataatggtt aaaccaattc atgcttctgt
2221 taataacgta tgaaagtgat agttgctcca catcctcacc aacacttggt tttaccagtc
2281 ttttaagatt ttatctattc tagtgggaca tagtggtttc tcattatggt tttaatttgc
2341 attcttctga tgatgatgaa gctgaattcc tttttatatg tttattggca tttggatata
2401 ctcctttgtg aatccctgtt aaagttgtcc tttgattatc taaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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