LOCUS BC064389 2540 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens synovial sarcoma, X breakpoint 2 interacting protein,
mRNA (cDNA clone MGC:75026 IMAGE:5745142), complete cds.
ACCESSION BC064389
VERSION BC064389.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2540)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: k Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281570.
FEATURES Location/Qualifiers
source 1..2540
/db_xref="H-InvDB:HIT000261352"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75026 IMAGE:5745142"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2540
/gene="SSX2IP"
/gene_synonym="ADIP"
/gene_synonym="KIAA0923"
/db_xref="GeneID:117178"
/db_xref="MIM:608690"
CDS 241..1920
/gene="SSX2IP"
/gene_synonym="ADIP"
/gene_synonym="KIAA0923"
/codon_start=1
/product="SSX2IP protein"
/protein_id="AAH64389.1"
/db_xref="GeneID:117178"
/db_xref="MIM:608690"
/translation="MGDWMTVTDPGLSSESKTISQYTSETKMSPSSLYSQQVLCSSIP
LSKNVHSFFSAFCTEDNIEQSISYLDQELTTFGFPSLYEESKGKETKRELNIVAVLNC
MNELLVLQRKNLLAQENVETQNLKLGSDMDHLQSCYSKLKEQLETSRREMIGLQERDR
QLQCKNRNLHQLLKNEKDEVQKLQNIIASRATQYNHDMKRKEREYNKLKERLHQLVMN
KKDKKIAMDILNYVGRADGKRGSWRTGKTEARNEDEMYKILLNDYEYRQKQILMENAE
LKKVLQQMKKEMISLLSPQKKKPRERVDDSTGTVISDVEEDAGELSRESMWDLSCETV
REQLTNSIRKQWRILKSHVEKLDNQVSKVHLEGFNDEDVISRQDHEQETEKLELEIQQ
CKEMIKTQQQLLQQLATAYDDDTTSLLRDCYLLEEKERLKEEWSLFKEQKKNFERERR
SFTEAAIRLGLERKAFEEERASWLKQQFLNMTTFDHQNSENVKLFSAFSGSSDWDNLI
VHSRQPQKKPHSVSNGSPVCMSKLTKSLPASPSTSDFCQTRSCISEHRAKN"
BASE COUNT 918 a 432 c 572 g 618 t
ORIGIN
1 gcgccggcaa ggggcgggcg cgcgcggagg tgagagccgg cacctggctc agcgccccgt
61 tgttcggcgg gaggctccgc gcggctgttg gggccgttgc agggtgcggg cgagcgtcga
121 cccgggccgc tcctggagga ggaggtggga ggagatgcct acatagaaga gtgacagcag
181 ctagactaaa tgtttaactg ctgaactagt tcctcaggta tcctggctct agagattgct
241 atgggagatt ggatgactgt tacagatcca ggtctgtctt cagaaagcaa aactatctct
301 caatatacct cagaaacaaa gatgtctcca tcaagtttat actcacagca agtgctatgt
361 tcttcaatac ctttatcgaa aaatgtgcac agttttttca gtgccttctg cacagaagat
421 aatattgaac agagtatctc atatcttgat caggaattga ctacttttgg ttttccttca
481 ttatatgaag aatccaaagg taaagagaca aagagagagt taaatatagt agctgtacta
541 aattgtatga atgagctgct tgtgcttcag cggaagaacc ttctagctca ggaaaatgtg
601 gagacacaga atttgaagct gggaagtgat atggaccatc tacagagctg ctactcaaaa
661 cttaaggaac aactggaaac ctccaggagg gaaatgattg ggcttcagga aagagacaga
721 cagttacaat gtaagaacag gaatttgcat cagctactaa agaatgagaa agatgaggtg
781 caaaaattac aaaatatcat tgcaagtcga gctactcagt ataatcatga tatgaagaga
841 aaagagcgtg aatataataa actgaaggaa cgtctacatc aacttgttat gaacaagaaa
901 gataagaaaa tagctatgga cattttgaat tatgtcggga gagctgatgg aaaaagaggc
961 tcctggagga ctggtaaaac tgaagccagg aatgaagatg aaatgtataa aattctcttg
1021 aatgattatg aatatcgtca gaaacaaatc ctaatggaaa atgcagaact taagaaggtt
1081 cttcaacaaa tgaaaaagga aatgatttct cttctttctc cccaaaagaa gaaacctaga
1141 gaaagagtag atgatagtac aggaactgtt atttccgatg ttgaagaaga tgccggggaa
1201 ctaagcagag agagtatgtg ggacctttcc tgtgaaactg tgagagagca gcttacaaac
1261 agcatcagaa aacagtggag aattttgaaa agtcatgtag aaaagcttga taaccaagtt
1321 tcaaaggtac acctggaagg ttttaatgat gaagatgtaa tctcacgaca agaccatgaa
1381 caagaaactg aaaaactcga gttagaaatt cagcagtgta aagaaatgat taaaactcag
1441 caacagcttt tacagcagct cgctactgca tatgatgatg ataccacttc actattacga
1501 gactgttatt tgttggaaga aaaggaacgt ctcaaagaag aatggtccct ttttaaagag
1561 cagaaaaaga attttgagag ggagagacga agctttacag aagccgctat tcgcctggga
1621 ttggagagaa aggcatttga agaagaaaga gccagttggt taaagcagca gtttctaaat
1681 atgactacct ttgaccacca gaactcagaa aatgtgaaac ttttcagtgc cttctcagga
1741 agttctgatt gggacaatct tatagtgcac tcgaggcagc cgcaaaagaa gcctcacagt
1801 gtgtctaatg ggtctccagt ttgcatgtct aaacttacta aatctcttcc tgcttcacct
1861 tccacttcag acttttgcca gacacgttcc tgcatatctg aacatagggc aaagaactga
1921 gaaaagcctg ttcctgttga gtgaaaaaga tttgtgccca aggatgacag tgtaaaaaaa
1981 catggctctc caccctggga aacccatatg ttgctcttaa ttgctacatt ttggtgtttt
2041 cctgtatctc aagttattat atcattttct aagataagat caatactctg cttcagtgcc
2101 aattccaaga ttagttttaa acgaagaaga ggaagcaggt agaacattcc tagtaagaca
2161 gagaggaata gaaaagatca gagggttcaa tcaatgtact gaatataact gctgaagaaa
2221 ttaaaccaaa tcaggttgga ggagaacgta caaatcaaaa atggagtgtg gcgtcaagac
2281 ctggatcaca ggaaggttgc tatagtggat gctccttgag ctacacaaat tctcatgtag
2341 aaaaagatga cttaccttag acatgtggac tggaattttt ttcattaatg tgttcatcaa
2401 gtttcacatc taagttgaaa cagggtgtgt cataaagtca gttatctcta ataaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa
//