LOCUS BC064383 1723 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 9,
mRNA (cDNA clone MGC:74989 IMAGE:5737339), complete cds.
ACCESSION BC064383
VERSION BC064383.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1723)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1723)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: i Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254927.
FEATURES Location/Qualifiers
source 1..1723
/db_xref="H-InvDB:HIT000261346"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74989 IMAGE:5737339"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1723
/gene="SLC39A9"
/gene_synonym="FLJ11274"
/db_xref="GeneID:55334"
/db_xref="HGNC:HGNC:20182"
CDS 418..1341
/gene="SLC39A9"
/gene_synonym="FLJ11274"
/codon_start=1
/product="solute carrier family 39 (zinc transporter),
member 9"
/protein_id="AAH64383.1"
/db_xref="GeneID:55334"
/db_xref="HGNC:HGNC:20182"
/translation="MDDFISISLLSLAMLVGCYVAGIIPLAVNFSEERLKLVTVLGAG
LLCGTALAVIVPEGVHALYEDILEGKHHQASETHNVIASDKAAEKSVVHEHEHSHDHT
QLHAYIGVSLVLGFVFMLLVDQIGNSHVHSTDDPEAARSSNSKITTTLGLVVHAAADG
VALGAAASTSQTSVQLIVFVAIMLHKAPAAFGLVSFLMHAGLERNRIRKHLLVFALAA
PVMSMVTYLGLSKSSKEALSEVNATGVAMLFSAGTFLYVATVHVLPEVGGIGHSHKPD
ATGGRGLSCLEVAALVLGCLIPLILSVGHQH"
BASE COUNT 445 a 401 c 419 g 458 t
ORIGIN
1 gacaggggcg cctagggaac gaacaggttc gcttgagtca cttacccgcc gccgcctaag
61 acattgtgcc accctcaatc cgacaatcga agaaatcgat cattcgcaca ttttccccat
121 tgacttttcc catctctgtt aacccacgag aatctaatga ctggcatctg agaacccaga
181 gcctgggacc ttagattgct gtaagctttc tctggtgcta atatcagcaa aaagggtctg
241 ttgccgggta cgttcaagag gaaggtgcct cgtgaacaca tctgctggtg ggaaggccta
301 aagaactgga aagcccactc tcttggaacc accacacctg tttaaagaac ctaagcacca
361 tttaaagcca ctggaaattt gttgtctagt ggttgtgggt gaataaagga gggcagaatg
421 gatgatttca tctccattag cctgctgtct ctggctatgt tggtgggatg ttacgtggcc
481 ggaatcattc ccttggctgt taatttctca gaggaacgac tgaagctggt gactgttttg
541 ggtgctggcc ttctctgtgg aactgctctg gcagtcatcg tgcctgaagg agtacatgcc
601 ctttatgaag atattcttga gggaaaacac caccaagcaa gtgaaacaca taatgtgatt
661 gcatcagaca aagcagcaga aaaatcagtt gtccatgaac atgagcacag ccacgaccac
721 acacagctgc atgcctatat tggtgtttcc ctcgttctgg gcttcgtttt catgttgctg
781 gtggaccaga ttggtaactc ccatgtgcat tctactgacg atccagaagc agcaaggtct
841 agcaattcca aaatcaccac cacgctgggt ctggttgtcc atgctgcagc tgatggtgtt
901 gctttgggag cagcagcatc tacttcacag accagtgtcc agttaattgt gtttgtggca
961 atcatgctac ataaggcacc agctgctttt ggactggttt ccttcttgat gcatgctggc
1021 ttagagcgga atcgaatcag aaagcacttg ctggtctttg cattggcagc accagttatg
1081 tccatggtga catacttagg actgagtaag agcagtaaag aagccctttc agaggtgaac
1141 gccacgggag tggccatgct tttctctgcc gggacatttc tttatgttgc cacagtacat
1201 gtcctccctg aggtgggcgg aatagggcac agccacaagc ccgatgccac gggagggaga
1261 ggcctcagct gcctggaagt ggcagccctg gttctgggtt gcctcatccc tctcatcctg
1321 tcagtaggac accagcatta aatgttcaag gtccagcctt ggtccagggc cgtttgccat
1381 ccagtgagaa cagccggcac gtgacagcta ctcacttcct cagtctcttg tctcaccttg
1441 cgcatctcta catgtattcc tagagtccag aggggaggtg aggttaaaac ctgagtaatg
1501 gaaaagcttt tagagtagaa acacatttac gttgcagtta gctatagaca tcccattgtg
1561 ttatctttta aaaggccctt gacattttgc gttttaatat ttctcttaac cctattctca
1621 gggaagatgg aatttagttt taaggaaaag aggagaactt catactcaca atgaaatagt
1681 gattatgaaa atacagtgtt ctgtaattaa aaaaaaaaaa aaa
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