LOCUS BC064376 1960 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens LSM8 homolog, U6 small nuclear RNA associated (S.
cerevisiae), mRNA (cDNA clone IMAGE:5723621), with apparent
retained intron.
ACCESSION BC064376
VERSION BC064376.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1960)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1960)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1960
/db_xref="H-InvDB:HIT000261339"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5723621"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 598 a 371 c 417 g 574 t
ORIGIN
1 gctgcgttac ccggaaccgc cgggccgaac agcatgacgt ccgctttgga gaactacatc
61 aaccgtatcc tcaagctggc cgccgcgggc gtgagccggg gtcgcggaga ggccgcggtc
121 ggggatcggt gggaggttgg gaggcctggc ctcggcggga tcctgggggc gggcgaggag
181 atgagggccc cggaacgacc cagagttcgc cggcggcgcc tcgagccttc ccgctgctgc
241 gggcccaggg gtcctttcca ttttgcctgc aaaacccaaa taaaaaccca gtgtgattat
301 tccgaacttt tctgtcttaa aaaaaatgta cgctcttgat tcttacttac tatttcccta
361 tggcataagt gttaaagttt gtgaataaga tgaacagtcg tcctggcggc gacaacagtt
421 ttgcaaatct ttgtacttgt tttattcaca taatttgctc gttcgaggat agcaaaaagt
481 ttaacgatgg ttcacagact gtttctgtcc ctttaccact tgaagtccca acttgttggt
541 agaatgaaaa aaaatggttg ctgttgtaat ggattatagt gaggagcaag taacaacccc
601 atgggaagtc ttaaaataga ctttacaagt gttaccgttt taaagtctta ggacaaaaac
661 actacgttaa gctcaggtac aaactgggtg acaaaaatta aataccgaat gcttttaatg
721 atgcgttatt ggtaccctgt gacactgctt atatagtttc tttacttttg aattacagaa
781 gcctgtcctg gaagacagtt ttttaacatg ctggaaaatc gtccaacatc gattaattta
841 gtactcatcc acttttcatt ttagaaataa acaggcctaa gaaacgaaat atcctgcctg
901 aaataataga ttggtaacct tcctagtaga aaagtgtcaa aaatccagga tattttgaga
961 taagatacac cgatcacata cagaaagagg ttttcttttt ctattttttc ccttttttaa
1021 tcatgtaatt atcacaaaga caaaaacaga aggttttttt aagttttttt ttttttttct
1081 ttttttgagt cgagggtctc actctgttgc ccaggctgga gtgcagtggc ttgatcatgg
1141 ctcaatgcaa ccttgaactc ctgagcccaa gcaatcctcc tgcctctgcc tctgcctcct
1201 gagtagctgg gactataggt caccaggcca gggtaataga gatgggggta tcgctgtgtt
1261 gcccaagctg gtctcacctc aagtgatcct cctgccttgg cgtcgaagaa acttttaacg
1321 tttttatgta gtgaacttag tggctgtgtt gaatacttat acctagttgt catatttatt
1381 ctaaaaattc aaatcattcc cttgccagag tctgttttca atttgcattc cctaaggaac
1441 actttctttg attcagttat caggaactgt tgccgttatt acatcagatg ggagaatgat
1501 tgtgggaaca ctgaaaggtt ttgaccagac cattaatttg attttggatg aaagccatga
1561 acgagtattc agctcttcac agggggtaga acaagtggta ctaggattat acattgtaag
1621 aggtgacaac gttgcagtca ttggagaaat cgatgaagaa acagattctg cgcttgattt
1681 ggggaatatt cgagcagaac ctttaaattc tgtagcacac tgagcaaaaa ctacatactt
1741 ggacatctgt aaatctttgt acagaaactg attattctga ggatgatata tggagttttt
1801 atgaatgtgt cactggattt tgactcctta ttgattcatt gtaatatgta aattaaaata
1861 tttctacatt ttattgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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