LOCUS BC064363 1540 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens BARX homeobox 1, mRNA (cDNA clone MGC:75298
IMAGE:5555949), complete cds.
ACCESSION BC064363
VERSION BC064363.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1540)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1540)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: c Column: 1.
FEATURES Location/Qualifiers
source 1..1540
/db_xref="H-InvDB:HIT000261326"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75298 IMAGE:5555949"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1540
/gene="BARX1"
/db_xref="GeneID:56033"
/db_xref="HGNC:HGNC:955"
/db_xref="MIM:603260"
CDS 226..990
/gene="BARX1"
/codon_start=1
/product="BARX1 protein"
/protein_id="AAH64363.1"
/db_xref="GeneID:56033"
/db_xref="HGNC:HGNC:955"
/db_xref="MIM:603260"
/translation="MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGA
APAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALL
AAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKR
FEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPK
KNSIPTSEQLTEQERAKDAEKPAEVPGEPSDRSRED"
BASE COUNT 270 a 534 c 533 g 203 t
ORIGIN
1 ggcgtgggga gggggcgcag tcccgggttc gaccggccga gccccgcgcg ccccgcccgc
61 gccctgcgcc tccgcccggc cggccggcgg gggagggggc atgagccggc gcccgcgcgc
121 cgccccgagc tgcgggccgg cctagagccc cgcgcgggcc ccgcgccgga gccaagccgt
181 cgccgccgcc gccgccaaac cgcgggcgca gcagtgggcg ccgcgatgca gcggccgggg
241 gagccgggcg ccgcgcgctt cggcccgccc gagggctgcg cggaccaccg gccgcaccgc
301 tatcgcagct tcatgattga ggagatcctc acggagccac ccgggcccaa gggcgccgcg
361 cccgcagccg ccgctgccgc ggcgggcgag ctgctgaagt tcggcgtgca ggcgctgctg
421 gcggcgcggc ccttccacag ccacctggcc gtgctgaagg ccgagcaggc ggcggtgttc
481 aagttcccac tggcgccgct gggctgttca gggctgagct ctgcgttgct ggcggcaggg
541 cccgggctgc ccggcgccgc gggtgcgcca cacctgccgc tcgagttgca gctccgcggg
601 aagctggagg cggcaggccc tggggagcca ggcaccaaag ccaagaaggg gcgtcggagc
661 cgcactgtgt tcaccgagct gcagctgatg ggcctggaga aacgcttcga gaagcagaag
721 tacctttcca cgccggacag aatagatctt gctgagtccc tgggcctgag ccagttgcag
781 gtgaagacgt ggtaccagaa tcggaggatg aagtggaaga aaatagtgct gcagggcggc
841 ggcctggagt ctcccaccaa gcccaagggg cggcccaaga agaactcaat tccaacgagc
901 gagcagctta ctgagcagga gcgtgccaag gatgcagaga aaccggcgga ggtgccgggc
961 gagcccagcg acaggagccg cgaggactga gggcggtata cggtgcgggg cctgggatgc
1021 ccgcgccacc cgcagccccc tcactcggcg gaaacccgcg agccggccct tccgcgtcca
1081 agaagtttac ttcctaagcc tttttattat gatcttgaat gcggacaatt ggggccaaac
1141 gaggaaggac acagacccaa aagccagacc caggtcccag cgcgcttctg ggctctaacc
1201 tgggagactc gcatccagcc cggcggaagc tacagtctct accctgagct ccgtggcgca
1261 gagcgctcca cgcgtattca cgccccgctc ctcgcctgca cccccacccc gtctggggcc
1321 tgccctcccg gccggggagc ctccaggcac acacccgctt ctggacgtcg gggacccagc
1381 ggttgggctc aggccacaac ggcctgagat tgccccgggg caacccgtcg gctcggcctg
1441 gaggccgggt ccccgatgtc gctggggccc ctaccccctc ttgcgaagac ggtgactttt
1501 tttccaataa aatattttat gacacaaaaa aaaaaaaaaa
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