LOCUS BC064352 2513 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 194, mRNA (cDNA clone
IMAGE:4443844), partial cds.
ACCESSION BC064352
VERSION BC064352.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2513)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2513)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: j Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2513
/db_xref="H-InvDB:HIT000261315"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4443844"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2513
/gene="C20orf194"
/gene_synonym="DKFZp434N061"
/db_xref="GeneID:25943"
/db_xref="HGNC:HGNC:17721"
CDS <1..1081
/gene="C20orf194"
/gene_synonym="DKFZp434N061"
/codon_start=2
/product="C20orf194 protein"
/protein_id="AAH64352.1"
/db_xref="GeneID:25943"
/db_xref="HGNC:HGNC:17721"
/translation="KKTRLLVVLQGYTDVIDVVQALQTHPDSNVKASFTIGAITACVE
PMSCYMEHRFLFPKCLDQCSQGLVSNVVFTSHTTEQRHPLLVQLQSLIRAANPAAAFI
LAENGIVTRNEDIELILSENSFSSPEMLRSRYLMYPGWYEGKLNAGSVYPLMVQICVW
FGRPLEKTRFVAKCKAIQSSIKPSPFSGNIYHILGKVKFSDSERTMEVCYNTLANSLS
IMPVLEGPTPPPDSKSVSQDSSGQQECYLVFIGCSLKEDSIKDWLRQSAKQKPQRKAL
KTRGMLTQQEIRSIHVKRHLEPLPAGYFYNGTQFVNFFGDKTDFHPLMDQFMNDYVEE
ANREIEKYNQELEQQEYHDLFELKP"
BASE COUNT 606 a 629 c 667 g 611 t
ORIGIN
1 caagaagacc agactgctgg tggtgttaca aggctacaca gatgttattg atgttgtcca
61 ggccctgcag acccacccag actcaaatgt caaggcctcc ttcaccattg gtgccatcac
121 agcatgtgtg gagcccatga gctgctacat ggagcacaga tttctctttc ctaaatgtct
181 tgaccagtgt tcacaaggcc tggtgagtaa cgtggtattc accagtcaca ccacggagca
241 gcggcaccct ctccttgttc agctgcagag cctcatcagg gctgccaatc ctgctgcagc
301 cttcattctt gcagaaaatg ggattgtcac caggaatgaa gacattgagc tgattctctc
361 agaaaacagt ttttcaagtc ctgagatgct acgatctcga tatttaatgt atcctggctg
421 gtatgaaggt aaattgaatg ctggatcagt ctatccccta atggttcaga tctgcgtatg
481 gtttggccgt cccttggaga agactcgctt tgtggccaaa tgtaaagcaa ttcagtcctc
541 catcaagcca agtcccttct ccggaaacat ctaccacatc ctgggcaaag tgaagttttc
601 agactctgag aggaccatgg aggtctgcta caacacactg gccaactcct tgagcatcat
661 gccagttttg gaaggaccca caccaccacc agactccaaa agcgtatctc aagacagcag
721 cgggcagcag gagtgctacc ttgtgttcat cggctgctcc ctgaaggaag acagcatcaa
781 ggactggctg cggcagtcag ctaagcagaa gcctcagagg aaagccctga agaccagggg
841 gatgctgacg caacaggaga tcaggagcat ccacgtaaaa cgccacttgg aacccctacc
901 tgcaggctac ttttataatg gcacccaatt tgttaacttc tttggtgaca aaactgattt
961 tcacccactc atggaccagt tcatgaatga ctacgtggaa gaagccaacc gggaaattga
1021 gaagtataac caggagctgg aacagcagga gtatcatgac ctctttgagc tgaagcccta
1081 gaggaaggct gggcccgtac gtcctgcaga atgtccacct tggagatgga cgaacgggtg
1141 tcttaacctc agctctgctg gaggcctctc ccttaagggg ctgtctttgt tctccttggc
1201 ctgtgtgggc tggcttgagt gcatgttgtc tttattccct gtatagcgct gaagagcatc
1261 acctgcacca ttgattttgg gggtcggggg aatactcaag gatgagcaga tggggcctgc
1321 ccgtctacgt gtgcaactgg cagtccagga gctctgggtt tctgataaca ggatctcctt
1381 tgggctcttg aggttgggga gaagcattag gattacacag aggagctact gggacttaga
1441 aggaaccctg gctgcctgaa ctgtggccgt gtctgggagg cgaggccacg acaggcctca
1501 agcctcagat gctgctccac gagagccatc ttccccagtg gagtgcctgc ctcccctgct
1561 aggcccgttt ccctgaagga gctggccgta ctggccgtgg gcccagtcct gggaggagca
1621 gcacagcctt gcccaggccc agtccacaga gccagcagct tgggttgaga tgaatgatgt
1681 gttcacaaat gaggggattt cccttctgga ctaaactgaa ggagaggctt gttgctttcc
1741 agaggtgtgt ggctcttaag ttgacatcag cttttcccct tgtgggtggt tctttagctc
1801 tcctgtcaca ccattcgggt gtcctaatgt agggacaaga gcaagcctgc tgctcaggcc
1861 ccctggcgag gcttcacctc actgtggaag ggggcgtcct gcagctggtt agtcttaggc
1921 ctggtggctg atcacttgtg gggtcagtct ccagcaccca gcgctcccac aagccttgcc
1981 aaggaaggcc tgcttttcag ccacaaactt caggaaactc atccccccgc tccccaaagt
2041 gttgttgctg gccctgggct tgtgtggctc ctgaggattg ggaatttcaa ataattgcaa
2101 tgcctgagtt agaattcctt ctaatggcat cgttttaagc tggaccataa agcagagggg
2161 aattacaagt gtgtcccatg cctgaccttc ataattggtt tgggggacag gggagtcaca
2221 gccactgata tttaggtgat gtctcttagg acttcagtgc ctcagctgcc tgaactgtaa
2281 atgttttctg aatttcacat attttttttt gcatgcctta ggaagaagca cataggtaaa
2341 accagcagtt tccagtaata tagggggttt ttgagcaagg cccctggagc agcggagaga
2401 caagatggag cacatgtagt ctgtgtgcct ggtcacacag aggcctgcat gcaagtagca
2461 aagcagctct caagggcttg tcagtaaaat atattagaaa aaaaaaaaaa aaa
//