LOCUS BC064332 2366 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens deoxyribonuclease I, mRNA (cDNA clone IMAGE:5805504),
with apparent retained intron.
ACCESSION BC064332
VERSION BC064332.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2366)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: i Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2366
/db_xref="H-InvDB:HIT000261295"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5805504"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 552 a 680 c 693 g 441 t
ORIGIN
1 cacctccgaa gatcagcacc tcctcatggg ctcaagcgag gacaggagcc cgtcacccat
61 gagctctcaa gggcagagcc actgtcctgt ctcgatggct ccaccgtgac tccagtggac
121 tttggacagt ggggagcagg cccaacaggg ccactcggat gtggtcactc tggatttggg
181 tggatcagca ccaagctaga ctcatcccca gcccccaggt gctgttgctg ctcctgcgtg
241 aggccccatc cacagctgca gctgtggcag ggtggctagt ggtggccagc atggccctgc
301 tgcagctcca cgctgtgggg ggcgtggccc tgaccagcag ccacccctcc atgtgggcca
361 caggggagga gcttaggaag ccgccttggc aaggttccgc aggctctgcg tctggtgtgg
421 aagagctcac ggggaagcac tcctgcccag gacccgagga gccggccacc gttcagaagg
481 ccccagcttg aaggcctgga gagccgccca gcagcacaac acagggaagc ttggggaggt
541 ttaatttaac ctgagaaggc tgcagatcct cggggttggt gtaaaaacac ctcatcctga
601 tctgagaagg cggtcagctt ttctcctcgt tgccgttggc tgccagcacc cattctctgt
661 ggatgtgaaa atcccagaag ggctgggctt ccttcttggg cattccccag gcctatctcc
721 agagtggggc ccagcatggg aggattgtac cccactcact cccctgatgt ggggcttgga
781 cctacagctc gacagcaccc atggaatgtg ggcagaagcg acagcagcca gctccgcctt
841 ggccttaggg cggcacgtgt tctgcttgtg ccctgggagc ctccaccttc cacactgtgg
901 gaagagggtg cccagggagc tgcagtctct ccagcccagc cccaggacga ggcccaggca
961 gcagagccac cccagcagac ctggcagtgt gagagaaatg catgtgtata cactgagttt
1021 gcaggtggct gttacatggc agcattgact gacacagaca gaaaagagat ccacgaggga
1081 gaagtgagag tgctggagac tccacaagcc acaggctgca ggggcaggat ggcttcttag
1141 aagcaaaagg agaaaattgt catcaaagga tattccagat tcttgacagc attctcgtca
1201 tctctgagga catcaccatc atctcaggat gaggggcatg aagctgctgg gggcgctgct
1261 ggcactggcg gccctactgc agggggccgt gtccctgaag atcgcagcct tcaacatcca
1321 gacatttggg gagaccaaga tgtccaatgc caccctcgtc agctacattg tgcagatcct
1381 gagccgctat gacatcgccc tggtccagga ggtcagagac agccacctga ctgccgtggg
1441 gaagctgctg gacaacctca atcagtgggt gacagtggca gggtcatagg aagggatgca
1501 ccagacacct atcactacgt ggtcagtgag ccactgggac ggaacagcta taaggagcgc
1561 tacctgttcg tgtacaggcc tgaccaggtg tctgcggtgg acagctacta ctacgatgat
1621 ggctgcgagc cctgcgggaa cgacaccttc aaccgagagc cagccattgt caggttcttc
1681 tcccggttca cagaggtcag ggagtttgcc attgttcccc tgcatgcggc cccgggggac
1741 gcagtagccg agatcgacgc tctctatgac gtctacctgg atgtccaaga gaaatggggc
1801 ttggaggtga ggccctccca ggggcagtgg gcaccagcgg cctccgcatg tcccagggcc
1861 acaggcagcg tttcctggta ggacgtcatg ttgatgggcg acttcaatgc gggctgcagc
1921 tatgtgagac cctcccagtg gtcatccatc cgcctgtgga caagccccac cttccagtgg
1981 ctgatccccg acagcgctga caccacagct acacccacgc actgtgccta tgacaggatc
2041 gtggttgcag ggatgctgct ccaaggcgcc gttgttcccg actcggctct tccctttaac
2101 ttccaggctg cctatggcct gagtgaccaa ctggcccaag ccatcagtga ccactatcca
2161 gtggaggtga tgctgaagtg agcagcccct ccccacacca gttgaactgc aggaagagag
2221 gacccatcct gccacaggac ccagaaaaaa agcccaacac acactcgggt taagaaatac
2281 ctttaaattt aggtaaataa agctcaagga ggtggggctg tcaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaa
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