LOCUS BC064027 1731 bp mRNA linear HUM 18-JAN-2005 DEFINITION Homo sapiens dihydropyrimidine dehydrogenase, mRNA (cDNA clone IMAGE:6173084), complete cds. ACCESSION BC064027 VERSION BC064027.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1731) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1731) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (11-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: a Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557874 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1731 /db_xref="H-InvDB:HIT000261272" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6173084" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1731 /gene="DPYD" /gene_synonym="DHP" /gene_synonym="DPD" /db_xref="GeneID:1806" /db_xref="MIM:274270" CDS 64..585 /gene="DPYD" /gene_synonym="DHP" /gene_synonym="DPD" /codon_start=1 /product="DPYD protein" /protein_id="AAH64027.1" /db_xref="GeneID:1806" /db_xref="MIM:274270" /translation="MAPVLSKDSADIESILALNPRTQTHATLCSTSAKKLDKKHWKRN PDKNCFNCEKLENNFDDIKHTTLGERGALREAMRCLKCADAPCQKSCPTNLDIKSFIT SIANKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFAT ETLILAFSLMNHL" BASE COUNT 527 a 310 c 358 g 536 t ORIGIN 1 ggctggagct tgaggacgca aggagggttt gtcactggca gactcgagac tgtaggcact 61 gccatggccc ctgtgctcag taaggactcg gcggacatcg agagtatcct ggctttaaat 121 cctcgaacac aaactcatgc aactctgtgt tccacttcgg ccaagaaatt agacaagaaa 181 cattggaaaa gaaatcctga taagaactgc tttaattgtg agaagctgga gaataatttt 241 gatgacatca agcacacgac tcttggtgag cgaggagctc tccgagaagc aatgagatgc 301 ctgaaatgtg cagatgcccc gtgtcagaag agctgtccaa ctaatcttga tattaaatca 361 ttcatcacaa gtattgcaaa caagaactat tatggagctg ctaagatgat attttctgac 421 aacccacttg gtctgacttg tggaatggta tgtccaacct ctgatctttg tgtaggtgga 481 tgcaatttat atgccactga agagggaccc attaatattg gtggattgca gcaatttgct 541 actgagactt tgatcctggc tttctcttta atgaatcatt tgtaaagact ttgattcttc 601 agacactctt gggctctctg acgtctccta tttggagtca acaagcaggt taattcccat 661 gtatcattta aatgatcagc ttatatgaag ggtatagtaa gattttataa tctttggaga 721 ctagttggct agaaggtcaa attaagtgcc cgtcaaccta gatttttagt taatgactta 781 ctgatctggt tttgtcagca taaacacaat gtgttctttc attttgggac ccttcccata 841 atattcctca agcttaagtc tcactttgct cttagtaata aatcagggtt attcccttcc 901 tgctttctga caggttaatt ctaaagaaga gctcctggga ataagaaaat agaaacaatt 961 cgaggttgtg gattgttgca ataaattctg ggatttaatt tcttttctta ccaaattcaa 1021 aattgcatta ggcttacctg accactacga agtatgatct ttactacctg tgaaaatcct 1081 tagttgatgg agaagattca cttgaattcc tcctcacttt tctttgggga cccattgcct 1141 cttcattaaa ccagggcaag ctttcacaga tgcagtaagt gaaaggtcac atagtatgta 1201 tatcaactaa cacagcattt taaaacaaaa tgaattaaaa tgatatcatt agtaattgat 1261 ctggtcatga gaggtgtgtg tgtttgtgtg tgtgtgtgtg tgtgtgtgtg agagagagag 1321 agagaaagag agagagagac agggaaatac attattcctc tggaaactct cacatggttt 1381 taattctttt ctctgggaac actgtccctc tgggaactct tacttggttc taccactcat 1441 tcccagagca gagtctattt aagacagaga catgtgcctt cagaacagaa tttattagaa 1501 actcactaaa atttgagagt ggtcacactt aggtcttgcc ataagtatca cctaatgaag 1561 agttatgcat agattaggac tgcagtagat gcattttaag tgaatcaagg aatttagaat 1621 aggaatgtat ctgcttattt cattccaatt atagtttgta taattgtaat ttcaatatca 1681 aattataaat taaaaatgtc ctcgtgggaa ctactgaaaa aaaaaaaaaa a //