LOCUS BC064026 1014 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens host cell factor C1 regulator 1 (XPO1 dependent), mRNA
(cDNA clone MGC:70711 IMAGE:6201972), complete cds.
ACCESSION BC064026
VERSION BC064026.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1014)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1014)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50952465.
FEATURES Location/Qualifiers
source 1..1014
/db_xref="H-InvDB:HIT000261271"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70711 IMAGE:6201972"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1014
/gene="HCFC1R1"
/gene_synonym="FLJ20568"
/gene_synonym="HPIP"
/gene_synonym="MGC70711"
/db_xref="GeneID:54985"
/db_xref="HGNC:HGNC:21198"
CDS 285..701
/gene="HCFC1R1"
/gene_synonym="FLJ20568"
/gene_synonym="HPIP"
/gene_synonym="MGC70711"
/codon_start=1
/product="host cell factor C1 regulator 1 (XPO1
dependent)"
/protein_id="AAH64026.1"
/db_xref="GeneID:54985"
/db_xref="HGNC:HGNC:21198"
/translation="MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTK
RRLEEEQEPLRKQFLSEENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLL
WRYPGSLIPEALRLLRLGDTPSPPYPATPAGDIMEL"
BASE COUNT 260 a 357 c 252 g 145 t
ORIGIN
1 cgcgaaggtg gctggtgcgt accgtcccga accctaggag ccgaggtgag cgccgcgaag
61 acccccgaca ttaagaagtg gtgtccaccg cagccccctt aagccggata ccctccccca
121 ccccgaggag caagcctgcc ttccgccacg cgccgcccgt cttccgcgcc cgcgcagaac
181 ctcgcggctg tgcccgccta aagccacgcc catcctctct tggccacgcc ctcagagact
241 cctcccctgt cgcccagatc ccacccgcag gaccccaaaa cccaatgatc ctgcagcagc
301 ccttgcagcg aggcccccag ggaggggccc agcgcctccc gcgggccgcc ttgggggtga
361 cttggggcct ggacgccagc tcccctctcc gaggagctgt gcccatgagc accaagcggc
421 gcctggagga ggagcaggag cctctgcgca agcagtttct gtctgaggag aacatggcca
481 cccacttctc tcaactcagc ctgcacaatg accaccccta ctgcagcccc cccatgacct
541 tctccccagc cctgccccca ctcaggagcc cttgctctga gctgcttctc tggcgctatc
601 ctggcagcct catccctgag gccctccgtc tgctgaggct gggggacacc cccagtcccc
661 cctaccctgc aaccccagct ggggacataa tggagctctg agtgctggtg gacagtgccc
721 ctcccacctt ccttcttccc cacaacagaa gagaccagcg actcccgcaa agggacaagg
781 ttcctccctc tcctgcagag taggcatctg ggcaccaaga ccttccctca acagaggaca
841 ctgagcccaa cggagttctg ggatgggagg ggtgggagca tgggaaggga ggcatcccac
901 ccccaagaag aactgaataa agattgctga gcaaaggaaa aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//