LOCUS BC063877 2212 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens DENN/MADD domain containing 1B, mRNA (cDNA clone
MGC:75435 IMAGE:30377843), complete cds.
ACCESSION BC063877
VERSION BC063877.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2212)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2212)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: m Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450670.
FEATURES Location/Qualifiers
source 1..2212
/db_xref="H-InvDB:HIT000261253"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75435 IMAGE:30377843"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2212
/gene="DENND1B"
/gene_synonym="MGC27044"
/gene_synonym="RP11-53I24.2"
/db_xref="GeneID:163486"
CDS 171..1451
/gene="DENND1B"
/gene_synonym="MGC27044"
/gene_synonym="RP11-53I24.2"
/codon_start=1
/product="DENND1B protein"
/protein_id="AAH63877.1"
/db_xref="GeneID:163486"
/translation="MDCRTKANPDRTFDLVLKVKCHASENEDPVVLWKFPEDFGDQEI
LQSVPKFCFPFDVERVSQNQVGQHFTFVLTDIESKQRFGFCRLTSGGTICLCILSYLP
WFEVYYKLLNTLADYLAKELENDLNETLRSLYNHPVPKANTPVNLSVNQEIFIACEQV
LKDQPALVPHSYFIAPDVTGLPTIPESRNLTEYFVAVDVNNMLQLYASMLHERRIVII
SSKLSTLTACIHGSAALLYPMYWQHIYIPVLPPHLLDYCCAPMPYLIGIHSSLIERVK
NKSLEDVVMLNVDTNTLESPFSDLNNLPSDVVSALKNKLKKQSTATGDGVARAFLRAQ
AALFGSYRDALRYKPGEPITFCEESFVKHRSSVMKQFLETAINLQLFKQFIDGRLAKL
NAGRGFSDVFEEEITSGGFCGGKDKLQYDYPFSQ"
BASE COUNT 659 a 448 c 456 g 649 t
ORIGIN
1 gccgggggcg cagccgacat gggcccgccg ccacggctgc tgtgagcagc ctctttccct
61 gtgtggccgc cggcgtgggc ggggacggcg cgaccctcgc gcggccgggc tgcgggcttc
121 caggccagcg cgcgggggcc ggacggacag ccccacaccg acatgtaacc atggactgca
181 ggaccaaggc aaatccagac agaacctttg acttggtgtt gaaagtgaaa tgtcatgcct
241 ctgaaaatga agatcctgtg gtattgtgga aattcccaga ggactttgga gaccaggaaa
301 tactacagag tgtgccaaag ttctgttttc cctttgacgt tgaaagggtg tctcagaatc
361 aagttggaca gcactttacc tttgtactga cagacattga aagtaaacag agatttggat
421 tctgcagact gacgtcagga ggcacaattt gtttatgcat ccttagttac cttccctggt
481 ttgaagtgta ttacaagctt ctaaatactc ttgcagatta cttggctaag gaactggaaa
541 atgatttgaa tgaaactctc agatcactgt ataaccaccc agtaccaaag gcaaatactc
601 ctgtaaattt gagtgtgaac caagagatat ttattgcctg tgagcaagtt ctgaaagatc
661 agcctgctct agtaccgcat tcctacttca ttgcccctga tgtaactgga ctcccaacaa
721 tacccgagag tagaaatctt acagaatatt ttgttgccgt ggatgtgaac aacatgctgc
781 agctgtatgc cagtatgctg catgaaaggc gcatcgtgat tatctcgagc aaattaagca
841 ctttaactgc ctgtatccat ggatcagctg ctcttctata cccaatgtat tggcaacaca
901 tatacatccc agtgcttcct ccacacctgc tggactactg ctgtgcccca atgccatacc
961 tgattggaat acactccagc ctcatagaga gagtgaaaaa caaatcattg gaagatgttg
1021 ttatgttaaa tgttgataca aacacattag aatcaccatt tagtgacttg aacaacctac
1081 caagtgatgt ggtctcggcc ttgaaaaata aactgaagaa gcagtctaca gctacgggtg
1141 atggagtagc tagggccttt cttagagcac aggctgcttt gtttggatcc tacagagatg
1201 cactgagata caaacctggt gagcccatca ctttctgtga ggagagtttt gtaaagcacc
1261 gctcaagcgt gatgaaacag ttcctggaaa ctgccattaa cctccagctt tttaagcagt
1321 ttatcgatgg tcgactggca aaactaaatg caggaagggg tttctctgat gtatttgaag
1381 aagagatcac ttcaggtggc ttttgtggag gtaaagacaa gttacaatat gattatccat
1441 tttctcaata acaattttct tggtctttgc acttgtgtct gataaaacct atttcataaa
1501 caactaatga tttcctccta aatatgtaat gtcttaaata catttttcat cttataaaag
1561 ctatggaatt agcttatttt gcctgatacc tgttactcaa ggcattaagt tggcctcctg
1621 aattggcagc tgttggcctc gataatctct taatattgct ggaaattagt aatacagaaa
1681 tccagtcaac tcatatcttc ctgtctttcc ttctgaatag tagtattctc tgctagaaaa
1741 ctactagtga tggttattac tgagtatgaa tttaagaact gaggttatga ttggtaatac
1801 aatccaaaaa gaagggtctg aacaccaaaa ttctttatac atatttaagt aactgtatta
1861 ttattataca gatgtcttta cctttttgac tttatagatc actgcagcat taagaaagtt
1921 tccagtttac cattccataa gtacaattaa tccttctagt gtaaatgttc aaatactgtt
1981 ataattatct aggcaattaa taatttacaa actgatattt ttgcacgatt gtagtggtgt
2041 atagtcttga cttgcagagc attttgcttg agtccttgaa atgtcgtgtt cattcattat
2101 ttgctgagtg cttacaatgt attaggcact gttctaaata ttaagtgtac taaataaaca
2161 aaaatccttg tattctgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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