LOCUS BC063840 3399 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens bromodomain containing 2, mRNA (cDNA clone MGC:74927 IMAGE:6181728), complete cds. ACCESSION BC063840 VERSION BC063840.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3399) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3399) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: c Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12408641. FEATURES Location/Qualifiers source 1..3399 /db_xref="H-InvDB:HIT000261216_04" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74927 IMAGE:6181728" /tissue_type="Peripheral Nervous System, dorsal root ganglion" /clone_lib="Lupski_dorsal_root_ganglion" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3399 /gene="BRD2" /gene_synonym="D6S113E" /gene_synonym="FSRG1" /gene_synonym="KIAA9001" /gene_synonym="NAT" /gene_synonym="RING3" /gene_synonym="RNF3" /db_xref="GeneID:6046" /db_xref="MIM:601540" CDS 170..2680 /gene="BRD2" /gene_synonym="D6S113E" /gene_synonym="FSRG1" /gene_synonym="KIAA9001" /gene_synonym="NAT" /gene_synonym="RING3" /gene_synonym="RNF3" /codon_start=1 /product="BRD2 protein" /protein_id="AAH63840.1" /db_xref="GeneID:6046" /db_xref="MIM:601540" /translation="MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYEGFE SPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQP VDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAV SSVSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKK KGVKRKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDS QQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKH PMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRY AKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESE SSDSEEERAHRLAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGR AGADEDDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLQAGVQWRDL GLLQPPLLGFKRFSCLSLPSSQDYRLPKKATKTAPPALPTGYDSEEEEESRPMSYDEK RQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLS CLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKANEKTES SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG" misc_feature 398..715 /gene="BRD2" /gene_synonym="D6S113E" /gene_synonym="FSRG1" /gene_synonym="KIAA9001" /gene_synonym="NAT" /gene_synonym="RING3" /gene_synonym="RNF3" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" misc_feature 1211..1534 /gene="BRD2" /gene_synonym="D6S113E" /gene_synonym="FSRG1" /gene_synonym="KIAA9001" /gene_synonym="NAT" /gene_synonym="RING3" /gene_synonym="RNF3" /note="BROMO; Region: bromo domain" /db_xref="CDD:smart00297" BASE COUNT 982 a 885 c 834 g 698 t ORIGIN 1 cccaaagaga ctgctttcgt gccggccagg cagggggttt gtcgcctcga ggcccaagag 61 gaacggcctc cccccaactt agcgggttat gctggaccgg gcggtgaggg gaaccgaggc 121 cacccggact ttccgcggct gagggcagcg ccggttcctt gcggtcaaga tgctgcaaaa 181 cgtgactccc cacaataagc tccctgggga agggaatgca gggttgctgg ggctgggccc 241 agaagcagca gcaccaggga aaaggattcg aaaaccctct ctcttgtatg agggctttga 301 gagccccaca atggcttcgg tgcctgcttt gcaacttacc cctgccaacc caccaccccc 361 ggaggtgtcc aatcccaaaa agccaggacg agttaccaac cagctgcaat acctacacaa 421 ggtagtgatg aaggctctgt ggaaacatca gttcgcatgg ccattccggc agcctgtgga 481 tgctgtcaaa ctgggtctac cggattatca caaaattata aaacagccta tggacatggg 541 tactattaag aggagacttg aaaacaatta ttattgggct gcttcagagt gtatgcaaga 601 ttttaatacc atgttcacca actgttacat ttacaacaag cccactgatg atattgtcct 661 aatggcacaa acgctggaaa agatattcct acagaaggtt gcatcaatgc cacaagaaga 721 acaagagctg gtagtgacca tccctaagaa cagccacaag aagggggcca agttggcagc 781 gctccagggc agtgttacca gtgcccatca ggtgcctgcc gtctcttctg tgtcacacac 841 agccctgtat actcctccac ctgagatacc taccactgtc ctcaacattc cccacccatc 901 agtcatttcc tctccacttc tcaagtcctt gcactctgct ggacccccgc tccttgctgt 961 tactgcagct cctccagccc agccccttgc caagaaaaaa ggcgtaaagc ggaaagcaga 1021 tactaccacc cctacaccta cagccatctt ggctcctggt tctccagcta gccctcctgg 1081 gagtcttgag cctaaggcag cacggcttcc ccctatgcgt agagagagtg gtcgccccat 1141 caagccccca cgcaaagact tgcctgactc tcagcaacaa caccagagct ctaagaaagg 1201 aaagctttca gaacagttaa aacattgcaa tggcattttg aaggagttac tctctaagaa 1261 gcatgctgcc tatgcttggc ctttctataa accagtggat gcttctgcac ttggcctgca 1321 tgactaccat gacatcatta agcaccccat ggacctcagc actgtcaagc ggaagatgga 1381 gaaccgtgat taccgggatg cacaggagtt tgctgctgat gtacggctta tgttctccaa 1441 ctgctataag tacaatcccc cagatcacga tgttgtggca atggcacgaa agctacagga 1501 tgtatttgag ttccgttatg ccaagatgcc agatgaacca ctagaaccag ggcctttacc 1561 agtctctact gccatgcccc ctggcttggc caaatcgtct tcagagtcct ccagtgagga 1621 aagtagcagt gagagctcct ctgaggaaga ggaggaggaa gatgaggagg acgaggagga 1681 agaagagagt gaaagctcag actcagagga agaaagggct catcgcttag cagaactaca 1741 ggaacagctt cgggcagtac atgaacaact ggctgctctg tcccagggtc caatatccaa 1801 gcccaagagg aaaagagaga aaaaagagaa aaagaagaaa cggaaggcag agaagcatcg 1861 aggccgagct ggggccgatg aagatgacaa ggggcctagg gcaccccgcc cacctcaacc 1921 taagaagtcc aagaaagcaa gtggcagtgg gggtggcagt gctgctttag gcccttctgg 1981 ctttggacct tctggaggaa gtggcaccaa actccaggct ggagtgcagt ggcgtgatct 2041 cggcttactg caacctccac ttctcgggtt caagcgattc tcctgcctca gcctcccaag 2101 tagccaggat tacaggctcc ccaaaaaggc cacaaagaca gccccacctg ccctgcctac 2161 aggttatgat tcagaggagg aggaagagag caggcccatg agttacgatg agaagcggca 2221 gctgagcctg gacatcaaca aattacctgg ggagaagctg ggccgagttg tgcatataat 2281 ccaagccagg gagccctctt tacgtgattc aaacccagaa gagattgaga ttgattttga 2341 aacactcaag ccatccacac ttagagagct tgagcgctat gtcctttcct gcctacgtaa 2401 gaaaccccgg aagccctaca ccattaagaa gcctgtggga aagacaaagg aggaactggc 2461 tttggagaaa aagcgggaat tagaaaagcg gttacaagat gtcagcggac agctcaattc 2521 tactaaaaag ccccccaaga aagcgaatga gaaaacagag tcatcctctg cacagcaagt 2581 agcagtgtca cgccttagcg cttccagctc cagctcagat tccagctcct cctcttcctc 2641 gtcgtcgtct tcagacacca gtgattcaga ctcaggctaa ggggtcaggc cagatggggc 2701 aggaaggctc cgcaggaccg gacccctaga ccaccctgcc ccacctgccc cttccccctt 2761 tgctgtgaca cttcttcatc tcaccccccc ccgcccccct ctaggagagc tggctctgca 2821 gtgggggagg gatgcaggga catttactga aggagggaca tggacaaaac aacattgaat 2881 tcccagcccc attggggagt gatctcttgg acacagagcc cccattcaaa atggggcagg 2941 gcaagggtgg gagtgtgcaa agccctgatc tggagttacc tgaggccata gctgccctat 3001 tcacttctaa gggccctgtt ttgagattgt ttgttctaat ttattttaag ctaggtaagg 3061 ctggggggag ggtggggcca tggtcccctc agcctccatg gggagggaag aagggggagc 3121 tcttttttta cgttgatttt tttttttcta ctctgttttc cctttttcct tccgctccat 3181 ttggggccct gggggtttca gtcatctccc catttggtcc cctggactgt ctttgttgat 3241 tctaacttgt aaataaagaa aatattattc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3301 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3361 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //