LOCUS BC063838 2511 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens melanoma antigen family D, 4B, mRNA (cDNA clone MGC:74882 IMAGE:6185437), complete cds. ACCESSION BC063838 VERSION BC063838.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2511) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2511) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: d Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29337291. FEATURES Location/Qualifiers source 1..2511 /db_xref="H-InvDB:HIT000261214_04" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74882 IMAGE:6185437" /tissue_type="Peripheral Nervous System, dorsal root ganglion" /clone_lib="Lupski_dorsal_root_ganglion" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2511 /gene="MAGED4B" /db_xref="GeneID:81557" /db_xref="HGNC:HGNC:22880" /db_xref="MIM:300765" CDS 57..2282 /gene="MAGED4B" /codon_start=1 /product="melanoma antigen family D, 4B" /protein_id="AAH63838.1" /db_xref="GeneID:81557" /db_xref="HGNC:HGNC:22880" /db_xref="MIM:300765" /translation="MAEGSFSVQSESYSVEDMDEGSDEVGEEEMVEGNDYEEFGAFGG YGTLTSFDIHILRAFGSLGPGLRILSNEPWELENPVLAQTLVEALQLDPETLANETAA RAANVARAAASNRAARAAAAAARTAFSQVVASHRVATPQVSGEDTQPTTYAAEAQGPT PEPPLASPQTSQMLVTSKMAAPEAPATSAQSQTGSPAQEAATEGPSSACAFSQAPCAR EVDANRPSTAFLGQNDVFDFTQPAGVSGMAFPRPKRPAPAQEAATEGPSAASGVPQTG PGREVAATRPKTTKSGKALAKTRWVEPQNVVAAAAAKAKMATSIPEPEGAAAATAQHS AEPWARMGGKRTKKSKHLDDEYESSEEERETPAVPPTWRASQPSLTVRAQLAPRPPMA PRSQIPSRHVLCLPPRNVTLLQERANKLVKYLMIKDYKKIPIKRADMLKDVIREYDEH FPEIIERATYTLEKKFGIHLKEIDKEEHLYILVCTRDSSARLLGKTKDTPRLSLLLVI LGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFVKQKYLEYKKIPN SNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHFLEAVDDAFKTMDVDMA EEHARAQMRAQMNIGDEALIGRWSWDDIQVELLTWDEDGDFGDAWARIPFAFWARYHQ YILNSNRANRRATWRAGVSSGTNGGASTSVLDGPSTSSTIRTRNAARAGASFFSWIQH R" BASE COUNT 581 a 733 c 730 g 467 t ORIGIN 1 ggacgccatt ggagttcccg agaaggctga gctctcatct ccctgggacc cgcagcatgg 61 ctgagggaag cttcagcgtg caatcggaaa gctacagtgt tgaagacatg gatgagggta 121 gcgacgaagt cggggaggaa gagatggttg aaggcaacga ctatgaagaa ttcggtgcgt 181 ttggtggcta tggcaccctc accagctttg acatccatat cctcagagcc ttcggaagct 241 tgggtccagg ccttcgcatc ttatcgaatg agccctggga actggaaaac cctgtgctgg 301 cccagaccct ggtggaggca ttgcagctgg atccggaaac acttgccaat gagacggccg 361 cccgtgctgc caacgtagcc cgcgccgccg cctccaaccg tgcggctcgg gccgctgccg 421 ccgctgcccg taccgccttc agtcaggtgg tcgctagcca ccgggtggcc acgccgcagg 481 tctcaggaga ggatacccag cccacgacct acgccgccga ggctcagggg cccacccctg 541 agccacccct tgcttctccg cagacctccc agatgttagt caccagtaag atggctgccc 601 ccgaggctcc ggcaacctcc gcacagtccc agacaggctc cccggcccag gaggctgcta 661 ctgagggccc tagtagcgcc tgtgctttct ctcaggctcc gtgtgccagg gaggtggacg 721 ccaaccggcc cagcacagcc ttcctgggcc agaatgatgt cttcgatttc actcagccgg 781 caggtgtcag tggcatggcc ttcccgcgcc ccaagagacc tgccccagcc caagaggctg 841 ccacagaggg ccccagtgct gcctctggtg tgccccagac gggacctggc agggaggtgg 901 cagccacccg gcccaagacc accaagtcgg ggaaggcgct ggccaagact cggtgggtgg 961 agcctcagaa tgttgtggca gcagctgctg ccaaggccaa gatggccacg agcatccctg 1021 agccggaggg tgcagctgct gccactgctc agcacagtgc tgagccctgg gccaggatgg 1081 gaggcaagag gaccaagaag tccaagcacc tggatgatga gtatgagagc agcgaggagg 1141 agagagagac tcccgcggtc ccacccacct ggagagcatc acagccctca ttgacggtgc 1201 gggctcagtt ggcccctcgg cccccgatgg ccccgaggtc ccagataccc tcaaggcacg 1261 tactgtgcct gcccccccgc aacgtgaccc ttctgcagga gagggcaaat aagttggtga 1321 aatacctgat gattaaggac tacaagaaga tccccatcaa gcgcgcagac atgctgaagg 1381 atgtcatcag agaatatgat gaacatttcc ctgagatcat tgaacgagca acgtacaccc 1441 tggaaaagaa gtttgggatc cacctgaagg agatcgacaa ggaagaacac ctgtatattc 1501 ttgtctgcac acgggactcc tcagctcgcc tccttggaaa aaccaaggac actcccaggc 1561 tgagtctcct cttggtgatt ctgggcgtca tcttcatgaa tggcaaccgt gccagcgagg 1621 ctgtcctctg ggaggcacta cgcaagatgg gactgcgccc tggggtgagg cacccattcc 1681 tcggcgatct gaggaagctc atcacagatg actttgtgaa gcagaagtac ctggaataca 1741 agaagatccc caacagcaac ccacctgagt atgaattcct ctggggcctg cgagcccgcc 1801 atgagaccag caagatgagg gtcctgagat tcatcgccca gaatcagaac cgagaccccc 1861 gggaatggaa ggctcatttc ttggaggctg tggatgatgc tttcaagaca atggatgtgg 1921 atatggccga ggaacatgcc agggcccaga tgagggccca gatgaatatc ggggatgaag 1981 cgctgattgg acggtggagc tgggatgaca tacaagtcga gctcctgacc tgggatgagg 2041 acggagattt tggcgatgcc tgggccagga tcccctttgc tttctgggcc agataccatc 2101 agtacattct gaatagcaac cgtgccaaca ggagggccac gtggagagct ggcgtcagca 2161 gtggcaccaa tggaggggcc agcaccagcg tcctagatgg ccccagcacc agctccacca 2221 tccggaccag aaatgctgcc agagctggcg ccagcttctt ctcctggatc cagcaccgtt 2281 gacgaactgc agcgatctta ctggccaagc cagagcgcct cctctcagat tccttctcga 2341 cacagcaccc taggcggctt cttcctgtca gtcggaggtg gcatgcaaga tgaagctctc 2401 tttgctcttc ctgctttcat tttgtgcttt tccttgtgtt ttcatgtttt gggtatcagt 2461 gttacattaa agttgcaaaa ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //