LOCUS BC063829 5168 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens peroxisome proliferator-activated receptor gamma,
coactivator-related 1, mRNA (cDNA clone MGC:74642 IMAGE:6526680),
complete cds.
ACCESSION BC063829
VERSION BC063829.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5168)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5168)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40807451.
FEATURES Location/Qualifiers
source 1..5168
/db_xref="H-InvDB:HIT000261206"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74642 IMAGE:6526680"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5168
/gene="PPRC1"
/gene_synonym="KIAA0595"
/gene_synonym="MGC74642"
/gene_synonym="PRC"
/gene_synonym="RP11-302K17.6"
/db_xref="GeneID:23082"
/db_xref="HGNC:HGNC:30025"
CDS 7..5001
/gene="PPRC1"
/gene_synonym="KIAA0595"
/gene_synonym="MGC74642"
/gene_synonym="PRC"
/gene_synonym="RP11-302K17.6"
/codon_start=1
/product="peroxisome proliferator-activated receptor
gamma, coactivator-related 1"
/protein_id="AAH63829.1"
/db_xref="GeneID:23082"
/db_xref="HGNC:HGNC:30025"
/translation="MAARRGRRDGVAPPPSGGPGPDPGGGARGSGWGSRSQAPYGTLG
AVSGGEQVLLHEEAGDSGFVSLSRLGPSLRDKDLEMEELMLQDETLLGTMQSYMDASL
ISLIEDFGSLGESRLSLEDQNEVSLLTALTEILDNADSENLSPFDSIPDSELLVSPRE
GSSLHKLLTLSRTPPERDLITPVDPLGPSTGSSRGSGVEMSLPDPSWDFSPPSFLETS
SPKLPSWRPPRSRPRWGQSPPPQQRSDGEEEEEVASFSGQILAGELDNCVSSIPDFPM
HLACPEEEDKATAAEMAVPAAGDESISSLSELVRAMHPYCLPNLTHLASLEDELQEQP
DDLTLPEGCVVLEIVGQAATAGDDLEIPVVVRQVSPGPRPVLLDDSLETSSALQLLMP
TLESETEAAVPKVTLCSEKEGLSLNSEEKLDSACLLKPREVVEPVVPKEPQNPPANAA
PGSQRARKGRKKKSKEQPAACVEGYARRLRSSSRGQSTVGTEVTSQVDNLQKQPQEEL
QKESGPLQGKGKPRAWARAWAAALENSSPKNLERSAGQSSPAKEGPLDLYPKLADTIQ
TNPIPTHLSLVDSAQASPMPVDSVEADPTAVGPVLAGPVPVDPGLVDLASTSSELVEP
LPAEPVLINPVLADSAAVDPAVVPISDNLPPVDAVPSGPAPVDLALVDPVPNDLTPVD
PVLVKSRPTDPRRGAVSSALGGSAPQLLVESESLDPPKTIIPEVKEVVDSLKIESGTS
ATTHEARPRPLSLSEYRRRRQQRQAETEERSPQPPTGKWPSLPETPTGLADIPCLVIP
PAPAKKTALQRSPETPLEICLVPVGPSPASPSPEPRVSKPVASSPTEQVPSQEMPLLA
RPSPPVQSVSPAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQPPSLPLSMGPVLPDPF
THYAPLPSWPCYPHVSPSGYPCLPPPPTVPLVSGTPGAYAVPPTCSVPWAPPPAPVSP
YSSTCTYGPLGWGPGPQHAPFWSTVPPPPLPPASIGRAVPQPKMESRGTPAGPPENVL
PLSMAPPLSLGLPGHGAPQTEPTKVEVKPVPASPHPKHKVSALVQSPQMKALACVSAE
GVTVEEPASERLKPETQETRPREKPPLPATKAVPTPRQSTVPKLPAVHPARLRKLSFL
PTPRTQGSEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPPPAPADSLAVGNSGG
VDIPQEKRPLDRLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKAKSPKSTAQEGT
LKPEGVTEAKHPAAVRLQEGVHGPSRVHVGSGDHDYCVRSRTPPKKMPALVIPEVGSR
WNVKRHQDITIKPVLSLGPAAPPPPCIAASREPLDHRTSSEQADPSAPCLAPSSLLSP
EASPCRNDMNTRTPPEPSAKQRSMRCYRKACRSASPSSQGWQGRRGRNSRSVSSGSNR
TSEASSSSSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSS
SSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPG
RMTRSELKQRFSVFGEIEECTIHFRVQGDNYGFVTYRYAEEAFAAIESGHKLRQADEQ
PFDLCFGGRRQFCKRSYSDLDSNREDFDPAPVKSKFDSLDFDTLLKQAQKNLRR"
BASE COUNT 1122 a 1590 c 1362 g 1094 t
ORIGIN
1 gccaagatgg cggcgcgccg gggacggaga gacggagtcg cgccgccccc gagtgggggc
61 cccggtccgg accctggcgg gggagcccgc ggcagtggtt ggggaagtcg aagccaagcg
121 ccgtatggga ctttgggcgc tgtgagcggc ggcgagcagg tgctgctgca tgaggaggcg
181 ggtgattctg gctttgtcag tctctctcgg ctgggcccat ctctgaggga caaggacctg
241 gaaatggagg agctaatgct gcaggatgag acactgctgg ggaccatgca gagctacatg
301 gatgcctccc ttatctccct cattgaggat tttgggagcc ttggagagag caggttatct
361 ctggaggacc agaatgaagt gtcgctgctc acggctctga cggagatctt ggacaatgca
421 gattctgaga acctttctcc atttgacagc attcctgatt cggagctgct tgtgtcaccc
481 cgggagggct cctctctgca caagctgctt actctctctc ggacaccccc agaacgtgac
541 ctcatcaccc cagttgaccc actggggccc agtacaggca gcagtagagg gagtggggtt
601 gaaatgtctc ttccagatcc ctcttgggac ttctccccac cctctttctt agagacctct
661 tcccccaagc ttcctagctg gagaccccca agatcaagac cacgctgggg ccaatcccca
721 cctccccagc agcgcagtga tggagaagaa gaggaggagg tggccagctt cagtggccag
781 attcttgccg gggagcttga caactgtgtg agcagtatcc cggacttccc catgcatttg
841 gcctgccctg aggaggaaga taaagcaaca gcagcagaga tggcagtgcc agcagctggt
901 gatgagagca tctcctccct gagtgagctg gtgcgggcca tgcacccata ctgcctgccc
961 aacctcaccc acctggcatc acttgaggat gagcttcagg agcagccaga tgatttgaca
1021 ctgcctgagg gctgcgtagt gctggagatt gtggggcagg cagccacagc tggcgatgac
1081 ctggagatcc cagttgtggt gcgacaggtc tctcctggac cccggcctgt gctcctggat
1141 gactcgctag agactagttc tgccttgcag ctgcttatgc ctacactgga gtcagagaca
1201 gaggctgctg tgcccaaggt aaccctctgc tctgagaaag aggggttgtc attgaactca
1261 gaggagaagc tggactcagc ctgcttattg aagcccaggg aggtcgtgga gccggtggtg
1321 cccaaggagc ctcagaaccc acctgccaat gcagcaccag gttcccagag agctcgaaag
1381 ggcaggaaga agaagagcaa ggagcagcca gcagcctgtg tggaaggcta tgccaggagg
1441 ctgaggtcat cttctcgcgg gcagtctact gtaggtacag aagtgacctc tcaggtagac
1501 aacttgcaga aacagcctca ggaagaactt caaaaagagt ctgggcctct ccagggtaag
1561 gggaagcccc gggcttgggc tcgggcctgg gcagctgcct tggagaattc tagccctaag
1621 aacttggaga gaagtgctgg acaaagtagt cctgctaaag aaggccctct agacctctac
1681 ccaaagctgg ctgacactat ccaaaccaat cctataccaa cccatctctc attggtcgac
1741 tctgcccaag ccagccccat gccagttgac tctgttgaag ctgatcccac tgcagttggc
1801 cctgttctag ctggccctgt acctgttgac cctgggttgg ttgaccttgc ttcaaccagc
1861 tcagaactgg ttgagcctct cccggctgag ccagtgctga tcaacccagt cctggctgac
1921 tcagcagcag ttgaccctgc agtggttccc atctcagata acttgccacc agttgatgct
1981 gtcccgtctg gcccagcacc agttgatcta gcactggttg accctgttcc taatgacctg
2041 actccagttg acccagtgct agttaagtcc agaccaactg atcccagacg tggtgcagtg
2101 tcatcagccc tggggggttc agcaccccag ctcctcgtgg agtcagagtc cttggaccca
2161 ccaaagacca tcatccctga agtcaaagag gttgtggatt ctctgaaaat tgaaagtggt
2221 accagtgcta caacccatga agccagacct cggcctctca gcttatctga gtaccggcga
2281 cgaaggcagc aacgccaagc agaaacagaa gagagaagtc cacagccccc aactgggaag
2341 tggcctagcc ttccagagac tcccacaggg ctggcagaca tcccttgtct tgtcatccca
2401 ccagccccag ccaagaagac agctctgcag agaagccctg aaacacccct tgagatttgc
2461 cttgtgcctg taggtcccag ccctgcttct cctagtcctg agccacgtgt aagcaaacct
2521 gtggcctcat ctcccactga gcaggtgcca tcccaggaga tgccactgtt ggcgagacct
2581 tcccctcctg tgcagtctgt gtcccctgct gtgcccacac ctccctcgat gtctgctgcc
2641 ctgcctttcc ctgcaggtgg gcttggcatg ccccccagtc tgcccccacc tcccttgcag
2701 cctcctagtc ttccattgtc tatggggcca gtactacctg atccgtttac tcactatgcc
2761 cccttgccat cctggccttg ttatcctcat gtgtcccctt ctggctatcc ttgcctgccc
2821 cccccaccaa cggtgcccct agtgtctggt actcctggtg cctatgccgt gcctcccact
2881 tgcagtgtgc cttgggcacc ccctcctgcc ccagtctcac cttacagttc cacatgtacc
2941 tatgggccct tgggatgggg cccagggcct caacatgctc cattctggtc tactgttccc
3001 ccacctcctt tgcctccagc ctccattggg agagctgttc cccaacctaa aatggagtct
3061 aggggcactc cagctggccc tcctgaaaat gtacttccct tgtcgatggc tcctcccctc
3121 agtcttgggc tacctggcca tggagctcct cagacagagc ctaccaaggt ggaggtcaag
3181 ccagtgcctg catctcccca tccgaaacac aaggtgtctg ccctggtgca aagtccccag
3241 atgaaggctc tagcatgtgt gtctgctgaa ggtgtgactg ttgaggagcc tgcatcagag
3301 aggctaaagc ctgagaccca agagaccagg cccagggaga agcccccctt gcctgctacc
3361 aaggctgttc ccacaccaag gcagagcact gtccccaagc tgcctgctgt ccacccagcc
3421 cgtctaagga agctgtcctt cctgcctacc ccacgtactc agggttctga agatgtggta
3481 caggctttca tcagtgagat tggaattgag gcatcggacc tgtccagtct gctggagcag
3541 tttgagaaat cagaagccaa aaaggagtgt cctcctccgg ctcctgctga cagcttggct
3601 gtaggaaact caggcggcgt tgacattccc caggagaaga ggcccctaga ccggttacaa
3661 gccccagaac tggccaacgt ggcagggctc acccctccag ctacccctcc ccaccagtta
3721 tggaagcccc tggctgctgt ctcactgctg gccaaagcca aatctcctaa gtccaccgcc
3781 caggagggaa ccctgaagcc tgaaggagtt acggaggcca aacatccagc tgcagttcgc
3841 ctccaagaag gggtccatgg ccctagtcga gtccatgtgg gctctgggga ccatgactat
3901 tgtgtccgga gcaggacccc cccaaaaaag atgcctgccc tagtcattcc agaggtgggc
3961 tcccgatgga atgtcaagcg ccatcaggac atcaccatca aacctgtctt gtccttgggc
4021 ccagctgccc ctccgccccc atgcatagct gcctcccggg agccgcttga tcacaggact
4081 agcagtgagc aggcagatcc ctcagcaccc tgccttgccc catccagctt gctgtcccct
4141 gaggcctcac cctgccggaa tgacatgaac actaggactc cccctgaacc ctcagccaag
4201 cagcggtcaa tgcgctgtta ccgaaaagcc tgcaggtcag ccagcccctc aagccagggc
4261 tggcagggcc gccgaggccg caacagccgt tctgtcagct ctgggtccaa ccggactagc
4321 gaagcatctt cctcatcctc atcatcgtct tcctcatccc gatctcggtc caggtccctc
4381 tcccccccac acaagaggtg gcgaaggtcc agctgtagtt cctctggacg ttctcgaaga
4441 tgctcttcct cttcttcgtc atcatcttcc tcttcgtctt cctcatcctc atcatccagt
4501 tctcgaagcc gctcacgatc cccatccccc cgccggagaa gtgacaggag gcggcggtac
4561 agctcttatc gttcacatga ccattaccaa aggcaaagag tgctacaaaa ggagcgtgca
4621 atagaagaaa gaagggtggt cttcattgga aagatacctg gccgcatgac tcgatcagag
4681 ctgaaacaga ggttctccgt ttttggagag attgaggagt gcaccatcca cttccgtgtc
4741 caaggggaca actacggctt cgtcacttat cgctatgctg aggaggcatt tgcagccatt
4801 gagagtggcc acaagctgcg gcaggcagat gagcagccct ttgatctctg ctttgggggc
4861 cgaaggcagt tctgcaagag gagctattct gatcttgact ccaaccggga agactttgac
4921 ccagcacctg taaagagcaa atttgattct cttgactttg acacattgtt gaaacaggcc
4981 cagaagaacc tcaggaggta accttgggcc cttccctgct atcctttttc tcctttggag
5041 gtgcccaacc tcctccaccc ccttccccta ctctagggga gagagctgct agtgagatga
5101 ctgttttata aagaaatgga aaaaagtgaa ataaaaaata tgttgaatca gaaaaaaaaa
5161 aaaaaaaa
//