LOCUS BC063791 2945 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetratricopeptide repeat domain 27, mRNA (cDNA clone
MGC:70550 IMAGE:6500951), complete cds.
ACCESSION BC063791
VERSION BC063791.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2945)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2945)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476021.
FEATURES Location/Qualifiers
source 1..2945
/db_xref="H-InvDB:HIT000261177"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70550 IMAGE:6500951"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2945
/gene="TTC27"
/gene_synonym="FLJ20272"
/db_xref="GeneID:55622"
/db_xref="HGNC:HGNC:25986"
CDS 232..2763
/gene="TTC27"
/gene_synonym="FLJ20272"
/codon_start=1
/product="tetratricopeptide repeat domain 27"
/protein_id="AAH63791.1"
/db_xref="GeneID:55622"
/db_xref="HGNC:HGNC:25986"
/translation="MWTPELAILRGFPTEAERQQWKQEGVVGSESGSFLQLLLEGNYE
AIFLNSMTQNIFNSTTTAEEKIDSYLEKQVVTFLDYSTDLDTTERQQLIFLLGVSSLQ
LFVQSNWTGPPVDLHPQDFLSSVLFQQFSEVKGLDAFVLSLLTLDGESIYSLTSKPIL
LLLARIILVNVRHKLTAIQSLPWWTLRCVNIHQHLLEERSPLLFTLAENCIDQVMKLQ
NLFVDDSGRYLAIQFHLECAYVFLYYYEYRKAKDQLDIAKDISQLQIDLTGALGKRTR
FQENYVAQLILDVRREGDVLSNCEFTPAPTPQEHLTKNLELNDDTILNDIKLADCEQF
QMPDLCAEEIAIILGICTNFQKNNPVHTLTEVELLAFTSCLLSQPKFWAIQTSALILR
TKLEKGSTRRVERAMRQTQALADQFEDKTTSVLERLKIFYCCQVPPHWAIQRQLASLL
FELGCTSSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDV
LGDHSCYDKAWELSRYRSARAQRSKALLHLRNKEFQECVECFERSVKINPMQLGVWFS
LGCAYLALEDYQGSAKAFQRCVTLEPDNAEAWNNLSTSYIRLKQKVKAFRTLQEALKC
NYEHWQIWENYILTSTDVGEFSEAIKAYHRLLDLRDKYKDVQVLKILVRAVIDGMTDR
SGDVATGLKGKLQELFGRVTSRVTNDGEIWRLYAHVYGNGQSEKPDENEKAFQCLSKA
YKCDTQSNCWEKDITSFKEVVQRALGLAHVAIKCSKNKSSSQEAVQMLSSVRLNLRGL
LSKAKQLFTDVATGEMSRELADDITAMDTLVTELQDLSNQFRNQY"
BASE COUNT 895 a 578 c 678 g 794 t
ORIGIN
1 ggaagccaga ccagagagcg tgcgtgtttt tcccagggtg ccccgcgctg ctgttatggc
61 cgcctccttg aggtagtatc cgcacatgga attctagggc cgcaggtgta tttacggtaa
121 ctgtcgccac tagatttcag cgcctttgga ctctcctgtt ttcactttct tttgttgact
181 cccgtgtggc cctcgtggga gcctgttttg gctgcagcgg tgtctggggt gatgtggacc
241 ccggagctgg caattctgag gggattcccc actgaggctg agcggcagca atggaaacag
301 gagggggtcg tcggttcaga gagtggatct ttcctacaat tgctgctgga agggaactat
361 gaagccatat tcttaaattc aatgactcaa aatattttta attcaacaac aaccgctgaa
421 gaaaagattg atagctacct ggagaagcag gtagtaacat tcctggatta ctcaacagat
481 ttggacacaa cggaaagaca acagttgata tttctacttg gtgtgagcag tttgcaactt
541 tttgttcaga gcaactggac ggggccccct gttgacttac accctcagga ctttttgtca
601 tctgttttgt tccagcaatt cagtgaggtt aaaggactgg atgcatttgt tctgagcctg
661 ctcactctag atggtgaatc aatctacagc ctgacctcga agcctatact actgttatta
721 gcacgcatta tcctagtgaa tgtaagacat aaactgacag ctattcagag cttgccatgg
781 tggactttga gatgtgtgaa tattcatcag catttgcttg aggaacgctc acctctgctt
841 tttactcttg ccgaaaactg tattgatcaa gtgatgaaac tacagaatct gtttgtagat
901 gattcaggtc gatatttggc tattcaattc catctggaat gtgcatatgt gtttttatat
961 tattatgagt acagaaaagc aaaagatcag ttggatattg ctaaggacat cagccaatta
1021 caaattgatt tgacaggtgc tttgggaaaa agaacacggt tccaggaaaa ttatgtggca
1081 caactgattc tagatgtaag aagggaaggg gatgtccttt caaattgtga attcactcca
1141 gcacccactc ctcaggaaca tttaaccaag aatcttgagc tcaatgatga caccattctg
1201 aatgacataa agttagcaga ttgtgaacag ttccagatgc cggatctgtg tgctgaagag
1261 atcgctatta ttcttggaat ctgcactaat tttcaaaaga ataacccagt gcacacatta
1321 actgaagtgg agcttctggc atttacatca tgtttgcttt cacaaccaaa gttctgggcc
1381 attcagacat cagccttgat cctccggaca aaacttgaga aaggaagtac tcgccgagtg
1441 gaacgggcaa tgaggcagac acaggctctt gcagaccaat ttgaagataa aactacatct
1501 gtattggaac gcctgaagat tttctattgc tgtcaagtac cacctcactg ggccattcag
1561 cgccaacttg caagtttgct ctttgagttg ggatgtacca gttcagccct tcagatattt
1621 gaaaagctag aaatgtggga agatgttgtc atttgttatg aaagagccgg gcagcacgga
1681 aaggcagaag aaatccttag acaagagctg gagaaaaaag aaacgcctag tttatactgc
1741 ttgcttggag atgtcctcgg agaccattct tgctatgaca aggcctggga gttgtcccgg
1801 taccgcagtg ctcgtgctca gcgctccaaa gccctccttc atcttcggaa taaggagttt
1861 caagagtgtg tagagtgctt cgaacgctcg gttaagatta atcccatgca gctcggggtg
1921 tggttttctc tcggttgtgc ctatttggcc ttggaagact atcaaggttc agcaaaggca
1981 tttcagcgct gtgtgactct agaacccgat aatgctgaag cttggaacaa tttgtcaact
2041 tcctatatcc gattaaaaca aaaagtaaaa gcttttagaa ctttacaaga agctctcaag
2101 tgtaactatg aacactggca gatttgggaa aactacatcc tcaccagcac tgacgttggg
2161 gaattttcag aagccattaa agcttatcac cggctcttgg acttacgtga caaatacaaa
2221 gatgttcagg tccttaaaat tctagtcagg gcagtgattg atgggatgac tgatcgaagt
2281 ggagatgttg caactggcct caaaggaaag ctgcaggagt tatttggcag agtgacttca
2341 agagtgacaa atgatggaga aatctggagg ctgtatgccc acgtatatgg aaatgggcag
2401 agtgaaaagc ctgatgaaaa tgaaaaggca ttccagtgcc tctcaaaggc atacaagtgt
2461 gacacccagt ccaattgttg ggagaaagat attacatcat ttaaggaagt tgttcaaaga
2521 gccttaggac ttgcacatgt ggccataaaa tgcagtaaaa acaaatccag ttcccaagaa
2581 gctgtacaaa tgctttcttc tgttcgactc aatttacggg gcttgttatc taaagcaaag
2641 caacttttta cagatgtggc aactggagaa atgtccaggg aattagctga tgacataaca
2701 gctatggaca ccttagtgac agagctccaa gacctaagca accagtttcg aaatcagtat
2761 tgattctgct ggaagcagat tctggaaaag gtgctttcac ctgctgttaa aagatacatc
2821 tgtatatctg aaatgcaaga tattgatttt taaaataaat ttgttttatg acttaaaaaa
2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaa
//