LOCUS BC063790 2731 bp mRNA linear HUM 02-JAN-2004 DEFINITION Homo sapiens hypothetical protein FLJ30058, mRNA (cDNA clone MGC:70537 IMAGE:6196091), complete cds. ACCESSION BC063790 VERSION BC063790.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2731) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2731) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: g Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21450648. FEATURES Location/Qualifiers source 1..2731 /db_xref="H-InvDB:HIT000261176" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:70537 IMAGE:6196091" /tissue_type="Peripheral Nervous System, sympathetic trunk" /clone_lib="Lupski_sympathetic_trunk" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2731 /gene="FLJ30058" /db_xref="GeneID:158763" CDS 353..1588 /gene="FLJ30058" /codon_start=1 /product="FLJ30058 protein" /protein_id="AAH63790.1" /db_xref="GeneID:158763" /translation="MQVEEATGQAAGRRRGNVVRRVFGRIRRFFSRRRNEPTLPREFT RRGRRGAVSVDSLAELEDGALLLQTLQLSKISFPIGQRLLGSKRKMSLNPIAKQIPQV VEACCQFIEKHGLSAVGIFTLEYSVQRVRQLREEFDQGLDVVLDDNQNVHDVAALLKE FFRDMKDSLLPDDLYMSFLLTATLKPQDQLSALQLLVYLMPPCHSDTLERLLKALHKI TENCEDSIGIDGQLVPGNRMTSTNLALVFGSALLKKGKFGKRESRKTKLGIDHYVASV NVVRAMIDNWDVLFQVPPHIQRQVAKRVWKSSPEALDFIRRRNLRKIQSARIKMEEDA LLSDPVETSAEARAAVLAQSKPSDEGSSEEPAVPSGTARSHDDEEGAGNPPIPEQDRP LLRVPREKEAKTGVSYFFP" misc_feature 650..1111 /gene="FLJ30058" /note="RhoGAP; Region: RhoGAP domain. GTPase activator proteins towards Rho/Rac/Cdc42-like small GTPases" /db_xref="CDD:pfam00620" BASE COUNT 728 a 646 c 668 g 689 t ORIGIN 1 attgtatgct actggcacct tgagaaggtt gaaagcaatg agtgtcttgg gaggagcccc 61 aggacacaac cccgaccgca ggacgaagat ggtatcgata cacagcctct ctgagctgga 121 gcgtctgaag ctgcaagaga ctgcttacca cgaactcgtg gccagacatt tcctctccga 181 attcaaacct gacagagctc tgcctattga ccgtccgaac accttggata agtggtttct 241 gattttgaga ggacagcaga gggctgtatc acacaagaca tttggcatta gcctggaaga 301 ggtcctggtg aacgagttta cccgccgcaa gcatcttgaa ctgacagcca cgatgcaggt 361 tgaagaagcc accggtcagg ctgcgggccg tcgtcgggga aacgtggtgc gaagggtgtt 421 tggccgcatc cggcgctttt tcagtcgcag gcggaatgag cccaccttgc cccgggagtt 481 cactcgccgt gggcgtcgag gtgcagtgtc tgtggatagt ctggctgagc tggaagacgg 541 agccctgctg ctgcagaccc tgcagctttc aaaaatttcc tttccaattg gccaacgact 601 tctgggatcc aaaaggaaga tgagtctcaa tccgattgcg aaacaaatcc cccaggttgt 661 tgaggcttgc tgccaattca ttgaaaaaca tggcttaagc gcagtgggga tttttaccct 721 tgaatactcc gtgcagcgag tgcgtcagct ccgtgaagaa tttgatcaag gtctggatgt 781 agtgctggat gacaatcaga atgtgcatga tgtggctgca ctcctcaagg agtttttccg 841 tgacatgaag gattctctgc tgccagatga tctgtacatg tcattcctcc tgacagcaac 901 tttaaagccc caggatcagc tttctgccct gcagttgctg gtctacctga tgccaccctg 961 ccacagtgat accctggagc gtctgctgaa ggccctgcat aaaatcactg agaactgcga 1021 ggactcaatt ggcattgatg gacagttggt cccaggcaac cgtatgactt ccactaactt 1081 ggccttggtg tttggatctg ctctcctgaa aaaaggaaag tttggcaaga gagagtccag 1141 gaaaacaaag ctggggattg atcactatgt tgcttctgtc aatgtggtcc gtgccatgat 1201 tgataactgg gatgtcctct tccaggtgcc tccccatatt cagaggcagg ttgctaagcg 1261 cgtgtggaag tccagcccgg aagcacttga ttttatcaga cgcaggaact tgaggaagat 1321 ccagagtgca cgcataaaga tggaagagga tgcactactt tctgatccag tggaaacctc 1381 tgctgaagcc cgggctgctg tccttgctca aagcaagcct tctgatgaag gttcctctga 1441 ggagccagct gtgccttccg gcactgcccg ttcccatgac gatgaggaag gagcgggtaa 1501 ccctcccatt ccggagcaag accgcccatt gctccgtgtg ccccgggaga aggaggccaa 1561 aactggcgtc agctacttct ttccttagat gtttttcctt ctataaggtg ccagacaggg 1621 gaaaagggtg ggggtacatc tgggatgtca caggaaacat taaggagaga gttgaaggta 1681 aagatctgaa ggtaagaagg agttccacct gatgctcggg tcaggatgag aattccaaac 1741 acactgccag ccccttcact ggggatgctt ggtctcttct gctggtaaaa gcagagatgt 1801 ttctgtgtca tgcccaagct ccccggtgct accttgcctt tctcttttac ccctgatctt 1861 ggctttctct ctctctctgc agactttcct ttaattgatg tgacatttgt ggtaaacacc 1921 tttcccaggg aacctcacaa atcttgagac gctttccctt ccccaaatgg gattgcatga 1981 tttccctgac tttcctaccc tcctccagag agctcagttg gaaaggccct caagaggcat 2041 gctagaacgt taggtcagcc tactgacagc tgacaaacaa ttaatgcgaa atcatgtcac 2101 accaacccat agccgtgtcc acgcagcaac tccaccacct taggatttcc ccctccaaat 2161 tattcagacc aatggcttgc caaatggcct ctcccaaaat tctgtacagt tttgctcagg 2221 tcacgccaac agggaaacct caagtgtagg tctaattagt gtttctggga tccaaagtta 2281 gaggaaaatt tagattttat tgcctggatc tgctttaaag acaattggtg tttacaccct 2341 cttgtcagca aaacagctag ttaggtaagg acatatagtt ccaagtaggt aaagtcactt 2401 gattacaaat gttcttaact atcgtctctg taattccttt atacaggaca gtacaaaatt 2461 gtgggacatg ctctggtaac acacagatat gggttgcata tgatccagaa ttacagctga 2521 tattatggat gacaactgct aaggtccata aaatgaagac tgtattgtat tgagggatag 2581 aaattgatta tttaatgggt aacaactgct gagctcaaag atttgtgatt gttaaaactt 2641 ctctggcatt taatcattaa taaacatctg tattgtgaca gcagcaaaaa aaaaaaaaaa 2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //