LOCUS BC063635 1458 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 1,
mRNA (cDNA clone MGC:70953 IMAGE:4397753), complete cds.
ACCESSION BC063635
VERSION BC063635.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1458)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1458)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50659085.
FEATURES Location/Qualifiers
source 1..1458
/db_xref="H-InvDB:HIT000261089"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70953 IMAGE:4397753"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1458
/gene="PDSS1"
/gene_synonym="COQ1"
/gene_synonym="hDPS1"
/gene_synonym="MGC70953"
/gene_synonym="RP13-16H11.3"
/gene_synonym="TPT"
/db_xref="GeneID:23590"
/db_xref="HGNC:HGNC:17759"
/db_xref="MIM:607429"
CDS 17..937
/gene="PDSS1"
/gene_synonym="COQ1"
/gene_synonym="hDPS1"
/gene_synonym="MGC70953"
/gene_synonym="RP13-16H11.3"
/gene_synonym="TPT"
/codon_start=1
/product="PDSS1 protein"
/protein_id="AAH63635.1"
/db_xref="GeneID:23590"
/db_xref="HGNC:HGNC:17759"
/db_xref="MIM:607429"
/translation="MASRWWRWRRGCSWKPAARSPGPGSPGRAVPLGPSAAAEVRAQV
HRRKGLDLSQIPYINLVKHLTSACPNVCRISRFHHTTPDSKTHSGEKYTDPFKLGWRD
LKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQA
SQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIA
LARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCK
AVFPRNECYDHATVQFAWRCRQSSTVCTTE"
BASE COUNT 480 a 300 c 300 g 378 t
ORIGIN
1 ctttcagact ccgaccatgg cctcgcgctg gtggcggtgg cggcgcggct gctcctggaa
61 gccggcggcg cggagccccg ggcccggctc ccccggccgt gcggtaccgt tggggccgag
121 cgccgctgcc gaagtccgcg cgcaggttca taggcggaag ggacttgact tgtctcagat
181 accctatatt aatcttgtga agcatttaac atctgcctgt ccaaatgtat gtcgtatatc
241 acggtttcat cacacaaccc cagacagtaa aacacacagt ggtgaaaaat acaccgatcc
301 tttcaaactc ggttggagag acttgaaagg tctgtatgag gacattagaa aggaactgct
361 tatatcaaca tcagaactta aggaaatgtc tgagtactac tttgatggga aagggaaagc
421 ctttcgacca attattgtgg cgctaatggc ccgagcatgc aatattcatc ataacaactc
481 ccgacatgtg caagccagcc agcgcgccat agccttaatt gcagaaatga tccacactgc
541 tagtctggtt cacgatgacg ttattgacga tgcaagttct cgaagaggaa aacacacagt
601 taataagatc tggggtgaaa agaaggctgt tcttgctgga gatttaattc tttctgcagc
661 atctatagct ctggcacgaa ttggaaatac aactgttata tctattttaa cccaagttat
721 tgaagatttg gtgcgtggtg aatttcttca gctcgggtca aaagaaaatg agaatgaaag
781 atttgcacac taccttgaga agacattcaa gaagaccgcc agcctgatag ccaacagttg
841 taaagcagta tttcccagaa atgaatgcta tgatcatgcg acggttcagt ttgcctggag
901 atgtagacag agctcgacag tatgtactac agagtgatgg tgtgcaacaa acaacctacc
961 tcgcccagca gtactgccat gaagcaataa gagagatcag taaacttcga ccatccccag
1021 aaagagatgc cctcattcag ctttcagaaa ttgtactcac aagagataaa tgacaactct
1081 ttctgttctt tctggcagct atcttaccag actgtgccta aagaattttg tggaatacac
1141 tttgtttgct tcatgtgcag ataaccaaaa atcattttaa aagatatcaa acttattgat
1201 gggcaattta ttttttttta ttgcaaaagt tttttcagaa aactttttaa atgtaattaa
1261 taaaccacct gaatctgtca ttctagtcct ataaattata atcaaggtat cttgatggtt
1321 atatgtggta ttgtttacac tgttaatatc cacatgtaag tccattacac aaataaataa
1381 ccaatgttaa aattcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaa
//