LOCUS BC063554 2924 bp mRNA linear HUM 13-DEC-2004
DEFINITION Homo sapiens pleckstrin homology domain containing, family G (with
RhoGef domain) member 3, mRNA (cDNA clone IMAGE:4939677), partial
cds.
ACCESSION BC063554
VERSION BC063554.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2924)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2924)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2924
/db_xref="H-InvDB:HIT000261010"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4939677"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2924
/gene="PLEKHG3"
/db_xref="GeneID:26030"
CDS <1..2177
/gene="PLEKHG3"
/codon_start=3
/product="PLEKHG3 protein"
/protein_id="AAH63554.1"
/db_xref="GeneID:26030"
/translation="MSFESISSLPEVEPDPEAGSEQEVFSAVEGPSAEETPSDTESPE
VLETQLDAHQGLLGMDPPGDMVDFVAAESTEDLKALSSEEEEEMGGAAQEPESLLPPS
VLDQASVIAERFVSSFSRRSSVAQEDSKSSGFGSPRLVSRSSSVLSLEGSEKGLARHG
SATDSLSCQLSPEVDISVGVATEDSPSVNGMEPPSPGCPVEPDRSSCKKKESALSTRD
RLLLDKIKSYYENAEHHDAGFSVRRRESLSYIPKGLVRNSISRFNSLPRPDPEPVPPV
GSKRQVGSRPTSWALFELPGPSQAVKGDPPPISDAEFRPSSEIVKIWEGMESSGGSPG
KGPGQGQANGFDLHEPLFILEEHELGAITEESATASPESSSPTEGRSPAHLARELKEL
VKELSSSTQGELVAPLHPRIVQLSHVMDSHVSERVKNKVYQLARQYSLRIKSNKPVMA
RPPLQWEKVAPERDGKSPTVPCLQEEAGEPLGGKGKRKPVLSLFDYEQLMAQEHSPPK
PSSAGEMSPQRFFFNPSAVSQRTTSPGGRPSAWSPLSPTETFSWPDVRELCSKYASRD
EARRAGGGRPRGPPVNRSHSVPENMVEPPLSGRVGRCRSLSTKRGRGGGEAAQSPGPL
PQSKPDGGETLYVTADLTLEDNRRVIVMEKGPLPSPTAGLEESSGQGPSSPVALLGQV
QDFQQSAECQPKEEGSRDPADPSQQGRVRNLREKFQALNSVG"
BASE COUNT 697 a 832 c 888 g 507 t
ORIGIN
1 gcatgagctt cgagtccatt tcttccctgc cagaggttga gccggaccct gaggctggga
61 gtgagcaaga ggtattttct gctgtggaag ggcccagtgc cgaggagacg ccttcagaca
121 cagaatctcc agaagtcctg gagacacagc ttgatgccca ccagggcctt ctggggatgg
181 accccccagg tgacatggtg gacttcgtgg cagctgagag cactgaggac cttaaggccc
241 tgagcagcga ggaggaagaa gaaatgggag gtgccgccca ggagcctgag agccttctgc
301 caccctccgt gctggaccag gccagcgtca ttgcggagcg atttgtcagc agcttctctc
361 ggcggagcag cgtggcacag gaggacagca agtccagtgg ctttgggagc ccgcggctgg
421 tcagccggag cagcagcgtg ctcagcctgg agggcagcga gaagggcctg gcccggcatg
481 gcagtgccac agactccctc agctgtcagc tctccccaga agtggacatc agtgtggggg
541 tggccacaga ggacagccct tctgtcaatg ggatggagcc cccaagccca ggctgcccag
601 tggagcctga ccggtcttcc tgcaagaaga aggaatcagc actctccacc cgagaccggc
661 tgttgctaga caagattaag agctattatg aaaatgcaga acaccatgat gcaggcttca
721 gcgtccgtcg ccgggagagc ctctcctaca tccccaaagg actggtaaga aactccatct
781 ccaggttcaa cagccttccc cggccagacc cagagccagt acctccagtg gggagcaaga
841 gacaggtggg ctcccggccg acttcgtggg ccctgtttga gctcccagga ccaagccagg
901 cagtcaaagg ggacccacct cccatctcag atgctgagtt ccgcccatct tcagaaattg
961 tgaagatctg ggagggaatg gagtcttccg gagggagccc tgggaagggg ccaggccagg
1021 gccaggccaa tggctttgac ctgcatgagc cactcttcat cctggaggag catgagctgg
1081 gagccatcac agaggagtcg gccactgcct ccccggaaag ctcctctccc actgaggggc
1141 gcagcccggc ccacctggcc cgggagctga aagagctggt gaaggagctg agcagcagta
1201 cccaggggga gctggtggcc ccactgcacc cccgcatcgt gcagctctcc cacgtaatgg
1261 acagccacgt gagcgagcgc gtcaagaaca aggtctacca gctggcccgc cagtacagcc
1321 tccggatcaa gagcaacaag ccagtgatgg ccaggccacc actgcagtgg gaaaaggtgg
1381 cccctgagag ggatgggaag agccccactg tgccctgtct acaggaagag gctggagagc
1441 cattaggtgg caaaggtaag aggaagccgg tgctgtctct atttgactat gagcagctga
1501 tggcccagga gcacagccct cccaagccct cctcggctgg ggagatgtca ccacagcgtt
1561 tcttcttcaa cccgtctgct gtcagccaga ggaccacctc gcctgggggc cggccctccg
1621 cctggagccc cctcagcccc acagagacct tcagctggcc cgacgtccgt gagctctgct
1681 ccaagtatgc ctcccgcgat gaggcacgcc gagcaggggg cggccggccc cgcggcccac
1741 ccgtcaacag gagccactcg gtgccggaga acatggtaga gccacctctg tcgggcaggg
1801 tgggccgctg ccgcagcctg agcaccaaga ggggccgggg aggcggagag gctgcccaat
1861 cccctgggcc tctgccccag agcaagccgg atggaggcga gaccctgtat gtcactgcag
1921 acctcaccct ggaggacaac cggcgggtga ttgtcatgga gaagggaccc cttcccagcc
1981 ccactgcagg gctggaggag agcagtggcc agggaccaag ctcaccggtg gccctgctgg
2041 ggcaggttca ggacttccag cagtctgcag agtgccagcc gaaggaagag ggttccaggg
2101 acccggcaga cccgagccag cagggcagag tgagaaacct tagagagaag ttccaggcct
2161 tgaactctgt cggttgatgc tgactcctgg gggagggagg agtcatgttg gaggttgggg
2221 aagaacctgg gcatccttcc cctcaagcct gggctcatgg agcccctgcc cagggccctc
2281 aggtgggcgg aaagtccatc ccctccgccc ttcaggaagg atgctcccgt gtgcaggggt
2341 ctcctgcctg tgccatccac tggggctcga gacaatttcc cactcacctg tgaggccggt
2401 gtggctgctt cccttgtaaa tagttgttct ctggtaagaa gccaaatatt taagctcact
2461 tcttcccaga gagaggaagc tctgctcagg cctccagcgt tggctggcca tggccacagc
2521 cagatggagg agcccatccc caggagactc aggcagtggc ctggagaggc tttgttctgt
2581 aacggtgcct tttcttaggg tccaggcagg aatgaagcca ataatttatt gctttccatt
2641 ctgtggtatg atgtgcgtgt gcgtgagtgt gtggcccctg tttattcccc tcctgtcaag
2701 aatgaagtgg attcagttca ggtacttttg agggttgttg tgctgaccct gtggttgtcg
2761 ctgatgtaca cacatttcat tatttgccaa tggtgcaata accactgctg accaaaaaaa
2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//