LOCUS BC063303 4590 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens solute carrier family 7 (cationic amino acid
transporter, y+ system), member 1, mRNA (cDNA clone MGC:71710
IMAGE:30340706), complete cds.
ACCESSION BC063303
VERSION BC063303.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4590)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4590)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51173150.
FEATURES Location/Qualifiers
source 1..4590
/db_xref="H-InvDB:HIT000260824"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71710 IMAGE:30340706"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4590
/gene="SLC7A1"
/gene_synonym="CAT-1"
/gene_synonym="HCAT1"
/gene_synonym="REC1L"
/db_xref="GeneID:6541"
/db_xref="HGNC:HGNC:11057"
/db_xref="MIM:104615"
CDS 185..2074
/gene="SLC7A1"
/gene_synonym="CAT-1"
/gene_synonym="HCAT1"
/gene_synonym="REC1L"
/codon_start=1
/product="solute carrier family 7 (cationic amino acid
transporter, y+ system), member 1"
/protein_id="AAH63303.1"
/db_xref="GeneID:6541"
/db_xref="HGNC:HGNC:11057"
/db_xref="MIM:104615"
/translation="MGCKVLLNIGQQMLRRKVVDCSREETRLSRCLNTFDLVALGVGS
TLGAGVYVLAGAVARENAGPAIVISFLIAALASVLAGLCYGEFGARVPKTGSAYLYSY
VTVGELWAFITGWNLILSYIIGTSSVARAWSATFDELIGRPIGEFSRTHMTLNAPGVL
AENPDIFAVIIILILTGLLTLGVKESAMVNKIFTCINVLVLGFIMVSGFVKGSVKNWQ
LTEEDFGNTSGRLCLNNDTKEGKPGVGGFMPFGFSGVLSGAATCFYAFVGFDCIATTG
EEVKNPQKAIPVGIVASLLICFIAYFGVSAALTLMMPYFCLDNNSPLPDAFKHVGWEG
AKYAVAVGSLCALSASLLGSMFPMPRVIYAMAEDGLLFKFLANVNDRTKTPIIATLAS
GAVAAVMAFLFDLKDLVDLMSIGTLLAYSLVAACVLVLRYQPEQPNLVYQMASTSDEL
DPADQNELASTNDSQLGFLPEAEMFSLKTILSPKNMEPSKISGLIVNISTSLIAVLII
TFCIVTVLGREALTKGALWAVFLLAGSALLCAVVTGVIWRQPESKTKLSFKVPFLPVL
PILSIFVNVYLMMQLDQGTWVRFAVWMLIGFIIYFGYGLWHSEEASLDADQARTPDGN
LDQCK"
BASE COUNT 951 a 1257 c 1222 g 1160 t
ORIGIN
1 gttggtcctt gagcgcgtcc gacagtctgt ctgttcgcga tcctgccgga gccccgccgc
61 cgccggcttg gattctgaaa ccttccttgt atccctcctg agacatcttt gctgcaagat
121 cgaggctgtc ctctggtgag aaggtggtga ggcttcccgt catattccag ctctgaacag
181 caacatgggg tgcaaagtcc tgctcaacat tgggcagcag atgctgcggc ggaaggtggt
241 ggactgtagc cgggaggaga cgcggctgtc tcgctgcctg aacacttttg atctggtggc
301 cctcggggtg ggcagcacac tgggtgctgg tgtctacgtc ctggctggag ctgtggcccg
361 tgagaatgca ggccctgcca ttgtcatctc cttcctgatc gctgcgctgg cctcagtgct
421 ggctggcctg tgctatggcg agtttggtgc tcgggtcccc aagacgggct cagcttacct
481 ctacagctat gtcaccgttg gagagctctg ggccttcatc accggctgga acttaatcct
541 ctcctacatc atcggtactt caagcgtagc gagggcctgg agcgccacct tcgacgagct
601 gataggcaga cccatcgggg agttctcacg gacacacatg actctgaacg cccccggcgt
661 gctggctgaa aaccccgaca tattcgcagt gatcataatt ctcatcttga caggactttt
721 aactcttggt gtgaaagagt cggccatggt caacaaaata ttcacttgta ttaacgtcct
781 ggtcctgggc ttcataatgg tgtcaggatt tgtgaaagga tcggttaaaa actggcagct
841 cacggaggag gattttggga acacatcagg ccgtctctgt ttgaacaatg acacaaaaga
901 agggaagccc ggtgttggtg gattcatgcc cttcgggttc tctggtgtcc tgtcgggggc
961 agcgacttgc ttctatgcct tcgtgggctt tgactgcatc gccaccacag gtgaagaggt
1021 gaagaaccca cagaaggcca tccccgtggg gatcgtggcg tccctcttga tctgcttcat
1081 cgcctacttt ggggtgtcgg ctgccctcac gctcatgatg ccctacttct gcctggacaa
1141 taacagcccc ctgcccgacg cctttaagca cgtgggctgg gaaggtgcca agtacgcagt
1201 ggccgtgggc tccctctgcg ctctttccgc cagtcttcta ggttccatgt ttcccatgcc
1261 tcgggttatc tatgccatgg ctgaggatgg actgctattt aaattcttag ccaacgtcaa
1321 tgataggacc aaaacaccaa taatcgccac attagcctcg ggtgccgttg ctgctgtgat
1381 ggccttcctc tttgacctga aggacttggt ggacctcatg tccattggca ctctcctggc
1441 ttactcgttg gtggctgcct gtgtgttggt cttacggtac cagccagagc agcctaacct
1501 ggtataccag atggccagta cttccgacga gttagatcca gcagaccaaa atgaattggc
1561 aagcaccaat gattcccagc tggggttttt accagaggca gagatgttct ctttgaaaac
1621 catactctca cccaaaaaca tggagccttc caaaatctct gggctaattg tgaacatttc
1681 aaccagcctt atagctgttc tcatcatcac cttctgcatt gtgaccgtgc ttggaaggga
1741 ggctctcacc aaaggggcgc tgtgggcagt ctttctgctc gcagggtctg ccctcctctg
1801 tgccgtggtc acgggcgtca tctggaggca gcccgagagc aagaccaagc tctcatttaa
1861 ggttcccttc ctgccagtgc tccccatcct gagcatcttc gtgaacgtct atctcatgat
1921 gcagctggac cagggcacct gggtccggtt tgctgtgtgg atgctgatag gcttcatcat
1981 ctactttggc tatggcctgt ggcacagcga ggaggcgtcc ctggatgccg accaagcaag
2041 gactcctgac ggcaacttgg accagtgcaa gtgacgcaca gccccgcccc ccggaggtgg
2101 cagcagcccc gagggacgcc cccagaggac cgggaggcac cccaccctcc ccaccagtgc
2161 aacagaaacc acctgcgtcc acaccctcac tgcagccaaa ggtgcaatta cttgacctgc
2221 agccccagcc caccctcggc tctgcagccg gttctccggg ccctggtcac ctccagacag
2281 ctgcctggcc ggggccacta ggctgcggct ggccactgtg tctcctcact tctctgaaca
2341 aagcagttcc tcccctacca gctcagcccc gagctgccgc agcctcaggc agaacggagg
2401 tcaccttctc tccttatctt gggaaccagg ccttcctccc ggggactgtt ctgggattga
2461 aattgtgcat actccaaact ttcgcagcca tcttcccgct cagccccaga cacccagcaa
2521 tcaagccaga tgagtaccac aaaacagtgt gtccccagca gctccccacc ccagagccaa
2581 atgacagtag tgcacttaaa aaggaaaatc aggcctgttg tccttctccg gttgcattca
2641 gttgggtcat tagggccgga ccctgcctgc cccttggctt ctcagggctt tgctctgaca
2701 ccatgacagc tgcccggggc tgagggcagc tggctccact caaatgagga agaagggatc
2761 actcccatta gggcctgctt tgcttatgca tgtgtgtgca catgcatgta aaccagggac
2821 cttcagctca cggcctccag gcctgggcca gttcttgctg ctcctgccgt ctcccccgac
2881 tggctgtgtc ctgagtaact ggaacatgag actgtatctg caggactggc cccatggtgg
2941 ccgagtcaga agtctgtttc ctgtgagtcg ccaccgttca ctcagtcttg ccctcccatg
3001 ctttggagcc agtctggtgg ctcctgtaag gttctcaagg ctggtggcag ctcagtctgg
3061 ggtcaggaca tgtcggggtc atgcgtttct ggccctgaca taagctgtct ggcctctctg
3121 tgacatgatg aaattgaaat caatccacag tccatgaaat tgtgacactc caccagatta
3181 agttagggca taacattaac ttggaaatgg ccatgtcatc acccctgcgg ctgtcctata
3241 gctgagatgc gtgggtcgca ggggaggtga tttctaggca tattgctgtc ccttttgtgt
3301 atctgtcatc cggatgcttc ggaccccacg cctctgcaag tgggagagac ccgagcatcc
3361 tccccacccc catagctcca gtgcacgcca cccccgtctt gcctgggtcg gggcctgcgg
3421 ccagcaccat ttcacacaca ctccttgtag atgggagcca gaggaaacct gaacgtgggt
3481 ggagcgttcc actgagtcta cttcaggaga cagaaggccc atgctgatgg gggaggagga
3541 gggacgtggg cattttggac accaggggaa atggaaatgc tgctttcaaa acttagtttc
3601 ctttccattt cttcctagtc tggcctttga cacaaatctg gtagaaagaa gcctgataaa
3661 ttgagggcac ttgtaccctc cctgtgcccc cagaaggttc ttggagagaa gtgcaagaat
3721 ttgtgaacac ggcggtggag ggcgggtgga tggccatggg ctgggcctcc gtatcaggcc
3781 tgctcacctt gctgggagct ttattctgat ctcattttga atgttccaga gggagcatca
3841 taagagccca gagctccgat ttccaaagag tgatattgac atttatggag attggtgttg
3901 taacatattt tgataaatac taacttattt tgttggggtt ttggttgtct cttgtcttag
3961 gacctggtag ttatttgctt gatttttttt tccgttattt tctacatagg caaagagaat
4021 tcgagggata gacagtctcc aagaaaagtg aagtggtggg agagaattgc ttttttcttt
4081 tttttctttt ctctagtttt tctttctggc tgagatttcc gtgcaagaca gcacccaata
4141 gactatttag agttgacatt tgacatttta atgggcgcca tggctcattt tgtagattga
4201 gaaggtgcgt ctcccctgct ccaagtctca tcatgacagc gtgctgacag ctgggagtct
4261 gtggccttcc tcacgcagag gccttaaagc tggacacaga agcacgccta ggctgggcag
4321 ggatgggacc catgccccct ccttagagga cgggcttcct ggttaggaaa ggacacgtgg
4381 gggtgccttg cataatagtt cactggtcac cgtgctttta tgagtagtgt ttttgtgcac
4441 ttgccagggg ttttctctct gtgtgcgagg ggagtgattt aagcaatggt gtctggagta
4501 agccttacaa ttttaataga ctttttctta tcatatccct catttctttc cctgaaataa
4561 aaatacacac aagcaaaaaa aaaaaaaaaa
//