LOCUS BC063289 5462 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens complement component 4A (Rodgers blood group), mRNA (cDNA clone MGC:71601 IMAGE:5289068), complete cds. ACCESSION BC063289 VERSION BC063289.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5462) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5462) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: o Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 67782350. FEATURES Location/Qualifiers source 1..5462 /db_xref="H-InvDB:HIT000260810_07" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71601 IMAGE:5289068" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..5462 /gene="C4A" /gene_synonym="C4" /gene_synonym="C4A2" /gene_synonym="C4A3" /gene_synonym="C4A4" /gene_synonym="C4A6" /gene_synonym="C4B" /gene_synonym="C4S" /gene_synonym="CO4" /gene_synonym="CPAMD2" /gene_synonym="RG" /db_xref="GeneID:720" /db_xref="HGNC:HGNC:1323" /db_xref="MIM:120810" CDS 85..5319 /gene="C4A" /gene_synonym="C4" /gene_synonym="C4A2" /gene_synonym="C4A3" /gene_synonym="C4A4" /gene_synonym="C4A6" /gene_synonym="C4B" /gene_synonym="C4S" /gene_synonym="CO4" /gene_synonym="CPAMD2" /gene_synonym="RG" /codon_start=1 /product="complement component 4A (Rodgers blood group)" /protein_id="AAH63289.1" /db_xref="GeneID:720" /db_xref="HGNC:HGNC:1323" /db_xref="MIM:120810" /translation="MRLLWGLIWASSFFTLSLQKPRLLLFSPSVVHLGVPLSVGVQLQ DVPRGQVVKGSVFLRNPSRNNVPCSPKVDFTLSSERDFALLSLQVPLKDAKSCGLHQL LRGPEVQLVAHSPWLKDSLSRTTNIQGINLLFSSRRGHLFLQTDQPIYNPGQRVRYRV FALDQKMRPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISAR FSDGLESNSSTQFEVKKYVLPNFEVKITPGKPYILTVPGHLDEMQLDIQARYIYGKPV QGVAYVRFGLLDEDGKKTFFRGLESQTKLVNGQSHISLSKAEFQDALEKLNMGITDLQ GLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSLDLSKTKRHLVPGAPFLLQALVRE MSGSPASGIPVKVSATVSSPGSVPEVQDIQQNTDGSGQVSIPIIIPQTISELQLSVSA GSPHPAIARLTVAAPPSGGPGFLSIERPDSRPPRVGDTLNLNLRAVGSGATFSHYYYM ILSRGQIVFMNREPKRTLTSVSVFVDHHLAPSFYFVAFYYHGDHPVANSLRVDVQAGA CEGKLELSVDGAKQYRNGESVKLHLETDSLALVALGALDTALYAAGSKSHKPLNMGKV FEAMNSYDLGCGPGGGDSSLQVFQAAGLAFSDGDQWTLSRKRLSCPKEKTTRKKRNVN FQKAINEKLGQYASPTAKRCCQDGVTRLPMMRSCEQRAARVQQPDCWEPFLSCCQFAE SLRKKSRDKGQAGLQRALEILQEEDLIDEDDIPVRSFFPENWLWRVETVDRFQILTLW LPDSLTTWEIHGLSLSKTKGLCVATPVQLRVFREFHLHLRLPMSVRRFEQLELRPVLY NYLDKNLTVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVAFSVVPTAAAAVSLKVV ARGSFEFPVGDAVSKVLQIEKEGAIHREELVYELNPLDHRGRTLEIPGNSDPNMIPDG DFNSYVRVTASDPLDTLGSEGALSPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLDK TEQWSTLPPETKDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSL AQEQVGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRSMQGGLVGNDETVALTAFVT IALHHGLAVFQDEGAEPLKQRVEASISKANSFLGEIASAGLLGAHAAAITAYALTLTK APVDLLGVAHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTQAPRNPSDPMPQAPALWI ETTAYALLHLLLHEGKAEMADQAAAWLTRQGSFQGGFRSTQDTVIALDALSAYWIASH TTEERGLNVTLSSTGRNGFKSHALQLNNRQIRGLEEELQFSLGSKINVKVGGNSKGTL KVLRTYNVLDMKNTTCQDLQIEVTVKGHVEYTMEANEDYEDYEYDELPAKDDPDAPLQ PVTPLQLFEGRRNRRRREAPKVVEEQESRVHYTVCIWRNGKVGLSGMAIADVTLLSGF HALRADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFEAVQEVPVGLVQPA SATLYDYYNPERRCSVFYGAPSKSRLLATLCSAEVCQCAEGKCPRQRRALERGLQDED GYRMKFACYYPRVEYGFQVKVLREDSRAAFRLFETKITQVLHFTKDVKAAANQMRNFL VRASCRLRLEPGKEYLIMGLDGATYDLEGHPQYLLDSNSWIEEMPSERLCRSTRQRAA CAQLNDFLQEYGTQGCQV" BASE COUNT 1157 a 1586 c 1590 g 1129 t ORIGIN 1 agagtcaact ctgccccgag gcctagcttg gccagaaggt agcagacaga cagacggatc 61 taacctctct tggatcctcc agccatgagg ctgctctggg ggctgatctg ggcatccagc 121 ttcttcacct tatctctgca gaagcccagg ttgctcttgt tctctccttc tgtggttcat 181 ctgggggtcc ccctatcggt gggggtgcag ctccaggatg tgccccgagg acaggtagtg 241 aaaggatcag tgttcctgag aaacccatct cgtaataatg tcccctgctc cccaaaggtg 301 gacttcaccc ttagctcaga aagagacttc gcactcctca gtctccaggt gcccttgaaa 361 gatgcgaaga gctgtggcct ccatcaactc ctcagaggcc ctgaggtcca gctggtggcc 421 cattcgccat ggctaaagga ctctctgtcc agaacgacaa acatccaggg tatcaacctg 481 ctcttctcct ctcgccgggg gcacctcttt ttgcagacgg accagcccat ttacaaccct 541 ggccagcggg ttcggtaccg ggtctttgct ctggatcaga agatgcgccc gagcactgac 601 accatcacag tcatggtgga gaactctcac ggcctccgcg tgcggaagaa ggaggtgtac 661 atgccctcgt ccatcttcca ggatgacttt gtgatcccag acatctcaga gccagggacc 721 tggaagatct cagcccgatt ctcagatggc ctggaatcca acagcagcac ccagtttgag 781 gtgaagaaat atgtccttcc caactttgag gtgaagatca cccctggaaa gccctacatc 841 ctgacggtgc caggccatct tgatgaaatg cagttagaca tccaggccag gtacatctat 901 gggaagccag tgcagggggt ggcatatgtg cgctttgggc tcctagatga ggatggtaag 961 aagactttct ttcgggggct ggagagtcag accaagctgg tgaatggaca gagccacatt 1021 tccctctcaa aggcagagtt ccaggacgcc ctggagaagc tgaatatggg cattactgac 1081 ctccaggggc tgcgcctcta cgttgctgca gccatcattg agtctccagg tggggagatg 1141 gaggaggcag agctcacatc ctggtatttt gtgtcatctc ccttctcctt ggatcttagc 1201 aagaccaagc gacaccttgt gcctggggcc cccttcctgc tgcaggcctt ggtccgtgag 1261 atgtcaggct ccccagcttc tggcattcct gtcaaagttt ctgccacggt gtcttctcct 1321 gggtctgttc ctgaagtcca ggacattcag caaaacacag acgggagcgg ccaagtcagc 1381 attccaataa ttatccctca gaccatctca gagctgcagc tctcagtatc tgcaggctcc 1441 ccacatccag cgatagccag gctcactgtg gcagccccac cttcaggagg ccccgggttt 1501 ctgtctattg agcggccgga ttctcgacct cctcgtgttg gggacactct gaacctgaac 1561 ttgcgagccg tgggcagtgg ggccaccttt tctcattact actacatgat cctatcccga 1621 gggcagatcg tgttcatgaa tcgagagccc aagaggaccc tgacctcggt ctcggtgttt 1681 gtggaccatc acctggcacc ctccttctac tttgtggcct tctactacca tggagaccac 1741 ccagtggcca actccctgcg agtggatgtc caggctgggg cctgcgaggg caagctggag 1801 ctcagcgtgg acggtgccaa gcagtaccgg aacggggagt ccgtgaagct ccacttagaa 1861 accgactccc tagccctggt ggcgctggga gccttggaca cagctctgta tgctgcaggc 1921 agcaagtccc acaagcccct caacatgggc aaggtctttg aagctatgaa cagctatgac 1981 ctcggctgtg gtcctggggg tggggacagt tcccttcagg tgttccaggc agcgggcctg 2041 gccttttctg atggagacca gtggacctta tccagaaaga gactaagctg tcccaaggag 2101 aagacaaccc ggaaaaagag aaacgtgaac ttccaaaagg cgattaatga gaaattgggt 2161 cagtatgctt ccccgacagc caagcgctgc tgccaggatg gggtgacacg tctgcccatg 2221 atgcgttcct gcgagcagcg ggcagcccgc gtgcagcagc cggactgctg ggagcccttc 2281 ctgtcctgct gccaatttgc tgagagtctg cgcaagaaga gcagggacaa gggccaggcg 2341 ggcctccaac gagccctgga gatcctgcag gaggaggacc tgattgatga ggatgacatt 2401 cccgtgcgca gcttcttccc agagaactgg ctctggagag tggaaacagt ggaccgcttt 2461 caaatattga cactgtggct ccccgactct ctgaccacgt gggagatcca tggcctgagc 2521 ctgtccaaaa ccaaaggcct atgtgtggcc accccagtcc agctccgggt gttccgcgag 2581 ttccacctgc acctccgcct gcccatgtct gtccgccgct ttgagcagct ggagctgcgg 2641 cctgtcctct ataactacct ggataaaaac ctgactgtga gcgtccacgt gtccccagtg 2701 gaggggctgt gcctggctgg gggcggaggg ctggcccagc aggtgctggt gcctgcgggc 2761 tctgcccggc ctgttgcctt ctctgtggtg cccacggcag ccgccgctgt gtctctgaag 2821 gtggtggctc gagggtcctt cgaattccct gtgggagatg cggtgtccaa ggttctgcag 2881 attgagaagg aaggggccat ccatagagag gagctggtct atgaactcaa ccccttggac 2941 caccgaggcc ggaccttgga aatacctggc aactctgatc ccaatatgat ccctgatggg 3001 gactttaaca gctacgtcag ggttacagcc tcagatccat tggacacttt aggctctgag 3061 ggggccttgt caccaggagg cgtggcctcc ctcttgaggc ttcctcgagg ctgtggggag 3121 caaaccatga tctacttggc tccgacactg gctgcttccc gctacctgga caagacagag 3181 cagtggagca cactgcctcc cgagaccaag gaccacgccg tggatctgat ccagaaaggc 3241 tacatgcgga tccagcagtt tcggaaggcg gatggttcct atgcggcttg gttgtcacgg 3301 gacagcagca cctggctcac agcctttgtg ttgaaggtcc tgagtttggc ccaggagcag 3361 gtaggaggct cgcctgagaa actgcaggag acatctaact ggcttctgtc ccagcagcag 3421 gctgacggct cgttccagga cccctgtcca gtgttagaca ggagcatgca ggggggtttg 3481 gtgggcaatg atgagactgt ggcactcaca gcctttgtga ccatcgccct tcatcatggg 3541 ctggccgtct tccaggatga gggtgcagag ccattgaagc agagagtgga agcctccatc 3601 tcaaaggcaa actcattttt gggggagata gcaagtgctg ggctcctggg tgcccacgca 3661 gctgccatca cggcctatgc cctgacactg accaaggcgc ctgtggacct gctcggtgtt 3721 gcccacaaca acctcatggc aatggcccag gagactggag ataacctgta ctggggctca 3781 gtcactggtt ctcagagcaa tgccgtgtca cccacccagg ctcctcgcaa cccatccgac 3841 cccatgcccc aggccccagc cctgtggatt gaaaccacag cctacgccct gctgcacctc 3901 ctgcttcacg agggcaaagc agagatggca gaccaggctg cggcctggct cacccgtcag 3961 ggcagcttcc aagggggatt ccgcagtacc caagacacgg tgattgccct ggatgccctg 4021 tctgcctact ggattgcctc ccacaccact gaggagaggg gtctcaatgt gactctcagc 4081 tccacaggcc ggaatgggtt caagtcccac gcgctgcagc tgaacaaccg ccagattcgc 4141 ggcctggagg aggagctgca gttttccttg ggcagcaaga tcaatgtgaa ggtgggagga 4201 aacagcaaag gaaccctgaa ggtccttcgt acctacaatg tcctggacat gaagaacacg 4261 acctgccagg acctacagat agaagtgaca gtcaaaggcc acgtcgagta cacgatggaa 4321 gcaaacgagg actatgagga ctatgagtac gatgagcttc cagccaagga tgacccagat 4381 gcccctctgc agcccgtgac acccctgcag ctgtttgagg gtcggaggaa ccgccgcagg 4441 agggaggcgc ccaaggtggt ggaggagcag gagtccaggg tgcactacac cgtgtgcatc 4501 tggcggaacg gcaaggtggg gctgtctggc atggccatcg cggacgtcac cctcctgagt 4561 ggattccacg ccctgcgtgc tgacctggag aagctgacct ccctctctga ccgttacgtg 4621 agtcactttg agaccgaggg gccccacgtc ctgctgtatt ttgactcggt ccccacctcc 4681 cgggagtgcg tgggctttga ggctgtgcag gaagtgccgg tggggctggt gcagccggcc 4741 agcgcaaccc tgtacgacta ctacaacccc gagcgcagat gttctgtgtt ttacggggca 4801 ccaagtaaga gcagactctt ggccaccttg tgttctgctg aagtctgcca gtgtgctgag 4861 gggaagtgcc ctcgccagcg tcgcgccctg gagcggggtc tgcaggacga ggatggctac 4921 aggatgaagt ttgcctgcta ctacccccgt gtggagtacg gcttccaggt taaggttctc 4981 cgagaagaca gcagagctgc tttccgcctc tttgagacca agatcaccca agtcctgcac 5041 ttcaccaagg atgtcaaggc cgctgctaat cagatgcgca acttcctggt tcgagcctcc 5101 tgccgccttc gcttggaacc tgggaaagaa tatttgatca tgggtctgga tggggccacc 5161 tatgacctcg agggacaccc ccagtacctg ctggactcga atagctggat cgaggagatg 5221 ccctctgaac gcctgtgccg gagcacccgc cagcgggcag cctgtgccca gctcaacgac 5281 ttcctccagg agtatggcac tcaggggtgc caggtgtgag ggctgccctc ccacctccgc 5341 tgggaggaac ctgaacctgg gaaccatgaa gctggaagca ctgctgtgtc cgctttcatg 5401 aacacagcct gggaccaggg catattaaag gcttttggca gcaaagaaaa aaaaaaaaaa 5461 aa //