LOCUS BC063289 5462 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens complement component 4A (Rodgers blood group), mRNA
(cDNA clone MGC:71601 IMAGE:5289068), complete cds.
ACCESSION BC063289
VERSION BC063289.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5462)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5462)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: o Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67782350.
FEATURES Location/Qualifiers
source 1..5462
/db_xref="H-InvDB:HIT000260810_07"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71601 IMAGE:5289068"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5462
/gene="C4A"
/gene_synonym="C4"
/gene_synonym="C4A2"
/gene_synonym="C4A3"
/gene_synonym="C4A4"
/gene_synonym="C4A6"
/gene_synonym="C4B"
/gene_synonym="C4S"
/gene_synonym="CO4"
/gene_synonym="CPAMD2"
/gene_synonym="RG"
/db_xref="GeneID:720"
/db_xref="HGNC:HGNC:1323"
/db_xref="MIM:120810"
CDS 85..5319
/gene="C4A"
/gene_synonym="C4"
/gene_synonym="C4A2"
/gene_synonym="C4A3"
/gene_synonym="C4A4"
/gene_synonym="C4A6"
/gene_synonym="C4B"
/gene_synonym="C4S"
/gene_synonym="CO4"
/gene_synonym="CPAMD2"
/gene_synonym="RG"
/codon_start=1
/product="complement component 4A (Rodgers blood group)"
/protein_id="AAH63289.1"
/db_xref="GeneID:720"
/db_xref="HGNC:HGNC:1323"
/db_xref="MIM:120810"
/translation="MRLLWGLIWASSFFTLSLQKPRLLLFSPSVVHLGVPLSVGVQLQ
DVPRGQVVKGSVFLRNPSRNNVPCSPKVDFTLSSERDFALLSLQVPLKDAKSCGLHQL
LRGPEVQLVAHSPWLKDSLSRTTNIQGINLLFSSRRGHLFLQTDQPIYNPGQRVRYRV
FALDQKMRPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISAR
FSDGLESNSSTQFEVKKYVLPNFEVKITPGKPYILTVPGHLDEMQLDIQARYIYGKPV
QGVAYVRFGLLDEDGKKTFFRGLESQTKLVNGQSHISLSKAEFQDALEKLNMGITDLQ
GLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSLDLSKTKRHLVPGAPFLLQALVRE
MSGSPASGIPVKVSATVSSPGSVPEVQDIQQNTDGSGQVSIPIIIPQTISELQLSVSA
GSPHPAIARLTVAAPPSGGPGFLSIERPDSRPPRVGDTLNLNLRAVGSGATFSHYYYM
ILSRGQIVFMNREPKRTLTSVSVFVDHHLAPSFYFVAFYYHGDHPVANSLRVDVQAGA
CEGKLELSVDGAKQYRNGESVKLHLETDSLALVALGALDTALYAAGSKSHKPLNMGKV
FEAMNSYDLGCGPGGGDSSLQVFQAAGLAFSDGDQWTLSRKRLSCPKEKTTRKKRNVN
FQKAINEKLGQYASPTAKRCCQDGVTRLPMMRSCEQRAARVQQPDCWEPFLSCCQFAE
SLRKKSRDKGQAGLQRALEILQEEDLIDEDDIPVRSFFPENWLWRVETVDRFQILTLW
LPDSLTTWEIHGLSLSKTKGLCVATPVQLRVFREFHLHLRLPMSVRRFEQLELRPVLY
NYLDKNLTVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVAFSVVPTAAAAVSLKVV
ARGSFEFPVGDAVSKVLQIEKEGAIHREELVYELNPLDHRGRTLEIPGNSDPNMIPDG
DFNSYVRVTASDPLDTLGSEGALSPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLDK
TEQWSTLPPETKDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSL
AQEQVGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRSMQGGLVGNDETVALTAFVT
IALHHGLAVFQDEGAEPLKQRVEASISKANSFLGEIASAGLLGAHAAAITAYALTLTK
APVDLLGVAHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTQAPRNPSDPMPQAPALWI
ETTAYALLHLLLHEGKAEMADQAAAWLTRQGSFQGGFRSTQDTVIALDALSAYWIASH
TTEERGLNVTLSSTGRNGFKSHALQLNNRQIRGLEEELQFSLGSKINVKVGGNSKGTL
KVLRTYNVLDMKNTTCQDLQIEVTVKGHVEYTMEANEDYEDYEYDELPAKDDPDAPLQ
PVTPLQLFEGRRNRRRREAPKVVEEQESRVHYTVCIWRNGKVGLSGMAIADVTLLSGF
HALRADLEKLTSLSDRYVSHFETEGPHVLLYFDSVPTSRECVGFEAVQEVPVGLVQPA
SATLYDYYNPERRCSVFYGAPSKSRLLATLCSAEVCQCAEGKCPRQRRALERGLQDED
GYRMKFACYYPRVEYGFQVKVLREDSRAAFRLFETKITQVLHFTKDVKAAANQMRNFL
VRASCRLRLEPGKEYLIMGLDGATYDLEGHPQYLLDSNSWIEEMPSERLCRSTRQRAA
CAQLNDFLQEYGTQGCQV"
BASE COUNT 1157 a 1586 c 1590 g 1129 t
ORIGIN
1 agagtcaact ctgccccgag gcctagcttg gccagaaggt agcagacaga cagacggatc
61 taacctctct tggatcctcc agccatgagg ctgctctggg ggctgatctg ggcatccagc
121 ttcttcacct tatctctgca gaagcccagg ttgctcttgt tctctccttc tgtggttcat
181 ctgggggtcc ccctatcggt gggggtgcag ctccaggatg tgccccgagg acaggtagtg
241 aaaggatcag tgttcctgag aaacccatct cgtaataatg tcccctgctc cccaaaggtg
301 gacttcaccc ttagctcaga aagagacttc gcactcctca gtctccaggt gcccttgaaa
361 gatgcgaaga gctgtggcct ccatcaactc ctcagaggcc ctgaggtcca gctggtggcc
421 cattcgccat ggctaaagga ctctctgtcc agaacgacaa acatccaggg tatcaacctg
481 ctcttctcct ctcgccgggg gcacctcttt ttgcagacgg accagcccat ttacaaccct
541 ggccagcggg ttcggtaccg ggtctttgct ctggatcaga agatgcgccc gagcactgac
601 accatcacag tcatggtgga gaactctcac ggcctccgcg tgcggaagaa ggaggtgtac
661 atgccctcgt ccatcttcca ggatgacttt gtgatcccag acatctcaga gccagggacc
721 tggaagatct cagcccgatt ctcagatggc ctggaatcca acagcagcac ccagtttgag
781 gtgaagaaat atgtccttcc caactttgag gtgaagatca cccctggaaa gccctacatc
841 ctgacggtgc caggccatct tgatgaaatg cagttagaca tccaggccag gtacatctat
901 gggaagccag tgcagggggt ggcatatgtg cgctttgggc tcctagatga ggatggtaag
961 aagactttct ttcgggggct ggagagtcag accaagctgg tgaatggaca gagccacatt
1021 tccctctcaa aggcagagtt ccaggacgcc ctggagaagc tgaatatggg cattactgac
1081 ctccaggggc tgcgcctcta cgttgctgca gccatcattg agtctccagg tggggagatg
1141 gaggaggcag agctcacatc ctggtatttt gtgtcatctc ccttctcctt ggatcttagc
1201 aagaccaagc gacaccttgt gcctggggcc cccttcctgc tgcaggcctt ggtccgtgag
1261 atgtcaggct ccccagcttc tggcattcct gtcaaagttt ctgccacggt gtcttctcct
1321 gggtctgttc ctgaagtcca ggacattcag caaaacacag acgggagcgg ccaagtcagc
1381 attccaataa ttatccctca gaccatctca gagctgcagc tctcagtatc tgcaggctcc
1441 ccacatccag cgatagccag gctcactgtg gcagccccac cttcaggagg ccccgggttt
1501 ctgtctattg agcggccgga ttctcgacct cctcgtgttg gggacactct gaacctgaac
1561 ttgcgagccg tgggcagtgg ggccaccttt tctcattact actacatgat cctatcccga
1621 gggcagatcg tgttcatgaa tcgagagccc aagaggaccc tgacctcggt ctcggtgttt
1681 gtggaccatc acctggcacc ctccttctac tttgtggcct tctactacca tggagaccac
1741 ccagtggcca actccctgcg agtggatgtc caggctgggg cctgcgaggg caagctggag
1801 ctcagcgtgg acggtgccaa gcagtaccgg aacggggagt ccgtgaagct ccacttagaa
1861 accgactccc tagccctggt ggcgctggga gccttggaca cagctctgta tgctgcaggc
1921 agcaagtccc acaagcccct caacatgggc aaggtctttg aagctatgaa cagctatgac
1981 ctcggctgtg gtcctggggg tggggacagt tcccttcagg tgttccaggc agcgggcctg
2041 gccttttctg atggagacca gtggacctta tccagaaaga gactaagctg tcccaaggag
2101 aagacaaccc ggaaaaagag aaacgtgaac ttccaaaagg cgattaatga gaaattgggt
2161 cagtatgctt ccccgacagc caagcgctgc tgccaggatg gggtgacacg tctgcccatg
2221 atgcgttcct gcgagcagcg ggcagcccgc gtgcagcagc cggactgctg ggagcccttc
2281 ctgtcctgct gccaatttgc tgagagtctg cgcaagaaga gcagggacaa gggccaggcg
2341 ggcctccaac gagccctgga gatcctgcag gaggaggacc tgattgatga ggatgacatt
2401 cccgtgcgca gcttcttccc agagaactgg ctctggagag tggaaacagt ggaccgcttt
2461 caaatattga cactgtggct ccccgactct ctgaccacgt gggagatcca tggcctgagc
2521 ctgtccaaaa ccaaaggcct atgtgtggcc accccagtcc agctccgggt gttccgcgag
2581 ttccacctgc acctccgcct gcccatgtct gtccgccgct ttgagcagct ggagctgcgg
2641 cctgtcctct ataactacct ggataaaaac ctgactgtga gcgtccacgt gtccccagtg
2701 gaggggctgt gcctggctgg gggcggaggg ctggcccagc aggtgctggt gcctgcgggc
2761 tctgcccggc ctgttgcctt ctctgtggtg cccacggcag ccgccgctgt gtctctgaag
2821 gtggtggctc gagggtcctt cgaattccct gtgggagatg cggtgtccaa ggttctgcag
2881 attgagaagg aaggggccat ccatagagag gagctggtct atgaactcaa ccccttggac
2941 caccgaggcc ggaccttgga aatacctggc aactctgatc ccaatatgat ccctgatggg
3001 gactttaaca gctacgtcag ggttacagcc tcagatccat tggacacttt aggctctgag
3061 ggggccttgt caccaggagg cgtggcctcc ctcttgaggc ttcctcgagg ctgtggggag
3121 caaaccatga tctacttggc tccgacactg gctgcttccc gctacctgga caagacagag
3181 cagtggagca cactgcctcc cgagaccaag gaccacgccg tggatctgat ccagaaaggc
3241 tacatgcgga tccagcagtt tcggaaggcg gatggttcct atgcggcttg gttgtcacgg
3301 gacagcagca cctggctcac agcctttgtg ttgaaggtcc tgagtttggc ccaggagcag
3361 gtaggaggct cgcctgagaa actgcaggag acatctaact ggcttctgtc ccagcagcag
3421 gctgacggct cgttccagga cccctgtcca gtgttagaca ggagcatgca ggggggtttg
3481 gtgggcaatg atgagactgt ggcactcaca gcctttgtga ccatcgccct tcatcatggg
3541 ctggccgtct tccaggatga gggtgcagag ccattgaagc agagagtgga agcctccatc
3601 tcaaaggcaa actcattttt gggggagata gcaagtgctg ggctcctggg tgcccacgca
3661 gctgccatca cggcctatgc cctgacactg accaaggcgc ctgtggacct gctcggtgtt
3721 gcccacaaca acctcatggc aatggcccag gagactggag ataacctgta ctggggctca
3781 gtcactggtt ctcagagcaa tgccgtgtca cccacccagg ctcctcgcaa cccatccgac
3841 cccatgcccc aggccccagc cctgtggatt gaaaccacag cctacgccct gctgcacctc
3901 ctgcttcacg agggcaaagc agagatggca gaccaggctg cggcctggct cacccgtcag
3961 ggcagcttcc aagggggatt ccgcagtacc caagacacgg tgattgccct ggatgccctg
4021 tctgcctact ggattgcctc ccacaccact gaggagaggg gtctcaatgt gactctcagc
4081 tccacaggcc ggaatgggtt caagtcccac gcgctgcagc tgaacaaccg ccagattcgc
4141 ggcctggagg aggagctgca gttttccttg ggcagcaaga tcaatgtgaa ggtgggagga
4201 aacagcaaag gaaccctgaa ggtccttcgt acctacaatg tcctggacat gaagaacacg
4261 acctgccagg acctacagat agaagtgaca gtcaaaggcc acgtcgagta cacgatggaa
4321 gcaaacgagg actatgagga ctatgagtac gatgagcttc cagccaagga tgacccagat
4381 gcccctctgc agcccgtgac acccctgcag ctgtttgagg gtcggaggaa ccgccgcagg
4441 agggaggcgc ccaaggtggt ggaggagcag gagtccaggg tgcactacac cgtgtgcatc
4501 tggcggaacg gcaaggtggg gctgtctggc atggccatcg cggacgtcac cctcctgagt
4561 ggattccacg ccctgcgtgc tgacctggag aagctgacct ccctctctga ccgttacgtg
4621 agtcactttg agaccgaggg gccccacgtc ctgctgtatt ttgactcggt ccccacctcc
4681 cgggagtgcg tgggctttga ggctgtgcag gaagtgccgg tggggctggt gcagccggcc
4741 agcgcaaccc tgtacgacta ctacaacccc gagcgcagat gttctgtgtt ttacggggca
4801 ccaagtaaga gcagactctt ggccaccttg tgttctgctg aagtctgcca gtgtgctgag
4861 gggaagtgcc ctcgccagcg tcgcgccctg gagcggggtc tgcaggacga ggatggctac
4921 aggatgaagt ttgcctgcta ctacccccgt gtggagtacg gcttccaggt taaggttctc
4981 cgagaagaca gcagagctgc tttccgcctc tttgagacca agatcaccca agtcctgcac
5041 ttcaccaagg atgtcaaggc cgctgctaat cagatgcgca acttcctggt tcgagcctcc
5101 tgccgccttc gcttggaacc tgggaaagaa tatttgatca tgggtctgga tggggccacc
5161 tatgacctcg agggacaccc ccagtacctg ctggactcga atagctggat cgaggagatg
5221 ccctctgaac gcctgtgccg gagcacccgc cagcgggcag cctgtgccca gctcaacgac
5281 ttcctccagg agtatggcac tcaggggtgc caggtgtgag ggctgccctc ccacctccgc
5341 tgggaggaac ctgaacctgg gaaccatgaa gctggaagca ctgctgtgtc cgctttcatg
5401 aacacagcct gggaccaggg catattaaag gcttttggca gcaaagaaaa aaaaaaaaaa
5461 aa
//