LOCUS BC063284 3883 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens CAS1 domain containing 1, mRNA (cDNA clone MGC:71559
IMAGE:5286382), complete cds.
ACCESSION BC063284
VERSION BC063284.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3883)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3883)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255036.
FEATURES Location/Qualifiers
source 1..3883
/db_xref="H-InvDB:HIT000260805"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71559 IMAGE:5286382"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3883
/gene="CASD1"
/gene_synonym="C7orf12"
/gene_synonym="FLJ21213"
/gene_synonym="FLJ21879"
/gene_synonym="NBLA04196"
/db_xref="GeneID:64921"
/db_xref="HGNC:HGNC:16014"
CDS 213..2606
/gene="CASD1"
/gene_synonym="C7orf12"
/gene_synonym="FLJ21213"
/gene_synonym="FLJ21879"
/gene_synonym="NBLA04196"
/codon_start=1
/product="CAS1 domain containing 1"
/protein_id="AAH63284.1"
/db_xref="GeneID:64921"
/db_xref="HGNC:HGNC:16014"
/translation="MAALAYNLGKREINHYFSVRSAKVLALVAVLLLAACHLASRRYR
GNDSCEYLLSSGRFLGEKVWQPHSCMMHKYKISEAKNCLVDKHIAFIGDSRIRQLFYS
FVKIINPQFKEEGNKHENIPFEDKTASVKVDFLWHPEVNGSMKQCIKVWTEDSIAKPH
VIVAGAATWSIKIHNGSSEALSQYKMNITSIAPLLEKLAKTSDVYWVLQDPVYEDLLS
ENRKMITNEKIDAYNEAAVSILNSSTRNSKSNVKMFSVSKLIAQETIMESLDGLHLPE
SSRETTAMILMNVYCNKILKPVDGSCCQPRPPVTLIQKLAACFFTLSIIGYLIFYIIH
RNAHRKNKPCTDLESGEEKKNIINTPVSSLEILLQSFCKLGLIMAYFYMCDSANLFMK
ENKFYTHSSFFIPIIYILVLGVFYNENTKETKVLNREQTDEWKGWMQLVILIYHISGA
STFLPVYMHIRVLVAAYLFQTGYGHFSYFWIKGDFGIYRVCQVLFRLNFLVVVLCIVM
DRPYQFYYFVPLVTVWFMVIYVTLALWPQIIQKKANGNCFWHFGLLLKLGFLLLFICF
LAYSQGAFEKIFSLWPLSKCFELKGNVYEWWFRWRLDRYVVFHGMLFAFIYLALQKRQ
ILSEGKGEPLFSNKISNFLLFISVVSFLTYSIWASSCKNKAECNELHPSVSVVQILAF
ILIRNIPGYARSVYSSFFAWFGKISLELFICQYHIWLAADTRGILVLIPGNPMLNIIV
STFIFVCVAHEISQITNDLAQIIIPKDNSSLLKRLACIAAFFCGLLILSSIQDKSKH"
BASE COUNT 1148 a 678 c 772 g 1285 t
ORIGIN
1 gaggccgccg agtcggccgc ggccgaggag gggcaggcgg aggtcggggg cgccgcggcc
61 gcggggtcag gttccccggc gggaggcgca ggtggcggcc tggggagctg gcggccgctc
121 ctcgcctggc tgcagcggcg gcagccccag tgctgcccct gtgcggcgcc cctttcccgc
181 tccgccgcgc actgttgtca tggaggaacc agatggcggc tctggcctac aacctgggca
241 agcgggagat caaccactac ttcagcgtga ggagcgccaa ggtgctggcg ctggtggccg
301 tgctgctgct cgcagcgtgc cacctcgcct cccgccgcta ccgaggcaat gattcgtgtg
361 aataccttct ctcaagtggc agatttcttg gagagaaagt ttggcaacct cacagttgta
421 tgatgcataa atacaaaatc agtgaagcaa agaactgcct tgtagataaa catattgcat
481 ttattggaga ttccagaatt cgtcaattgt tttattcttt tgtaaaaata attaatcccc
541 aattcaaaga agaaggaaat aagcatgaaa acattccttt tgaagacaag actgcatcag
601 ttaaagtgga ttttctgtgg catcctgaag ttaatggttc tatgaaacag tgtatcaaag
661 tgtggactga ggattccatt gcaaagccac atgtgattgt agcaggagct gccacatggt
721 ccatcaagat tcacaatggt agcagtgaag cgctttctca atataaaatg aacatcacct
781 ccatagcacc acttttagaa aaattggcaa agactagtga tgtttattgg gtcttacaag
841 atcctgttta tgaagatcta ttaagtgaaa ataggaagat gatcactaat gagaagatag
901 atgcttacaa tgaagctgca gtcagtattt tgaatagtag caccagaaat tctaaatcaa
961 atgttaagat gttcagtgtt tccaaattaa ttgctcaaga aaccatcatg gaatctttgg
1021 atggcttaca tcttcctgaa tcgagcagag aaactactgc aatgattctt atgaatgtgt
1081 attgcaataa gattttgaag cctgtagatg ggtcctgttg tcaacctcgg cctcctgtta
1141 ctctcataca gaagctagct gcttgttttt tcactttatc tattatcgga tatttaattt
1201 tttacataat tcatcgtaat gctcatcgga agaataagcc gtgtactgat ttggaaagtg
1261 gagaggaaaa gaaaaatatt atcaataccc ctgtgtcttc attagaaata cttttacaat
1321 ctttctgcaa acttggcctg attatggcat atttctatat gtgtgacagt gcaaatctgt
1381 tcatgaagga aaacaaattt tatacacatt catctttctt tattccaatt atctacattt
1441 tggttttggg agtattttat aatgaaaata ctaaagagac taaagtatta aatagagaac
1501 aaacagacga atggaaaggc tggatgcaac ttgtgatttt gatttatcac atttctggag
1561 caagtacatt tttgcctgta tacatgcaca ttcgagttct ggttgctgca tatttatttc
1621 agacagggta tgggcatttc tcatactttt ggataaaagg agattttgga atctacagag
1681 tatgtcaggt tttatttcgt ctcaatttcc tggtagtggt gttatgtata gtaatggatc
1741 gaccttatca attctattac tttgtcccct tggtcactgt atggttcatg gtcatatatg
1801 ttactttagc actatggcca caaataatcc aaaaaaaagc aaacggaaat tgtttctggc
1861 attttggctt actgttgaaa ctaggctttt tgctgttatt catatgtttt ttggcatatt
1921 ctcagggtgc atttgagaag atcttttctc tttggccatt gtccaagtgt tttgaactga
1981 aagggaatgt atatgaatgg tggttcagat ggaggttaga ccgttatgta gttttccacg
2041 gaatgctgtt tgcttttatt tatctggcct tgcagaagcg tcaaatactt tctgaaggaa
2101 agggtgaacc tcttttttca aacaaaattt caaattttct gttgtttatt tcagtagttt
2161 ctttcttgac ctattccatc tgggctagca gttgtaaaaa caaagcagag tgcaatgaac
2221 tccatccgtc tgtttctgtg gtacagattt tagccttcat cctaataaga aacatccctg
2281 gatatgcccg ttcagtttac agttcatttt ttgcttggtt tggaaaaatt tcattagagc
2341 tatttatttg ccagtatcac atatggctgg cagcggacac aaggggtatc ttggtactga
2401 tacctggaaa ccctatgctc aacatcattg tcagcacttt catatttgtt tgtgtggcac
2461 atgaaatttc tcagatcact aatgatcttg cacagattat tattcctaaa gataactcat
2521 ctctcttgaa aaggttggca tgtatagctg catttttttg tggactcctc atcttatcat
2581 ccattcaaga taaatcaaaa cattaggttc caaaaattct aaaaaaccta aactcttcag
2641 gctacctttg tgtgtctcta gaagagaaaa gcatctatct ggagatataa atgtgtatgt
2701 aaatataaac gtttgtggca agaggacagt tctgtgacat ctgttgaaca tatgtggttg
2761 tatatattgg aaatgtacat atccaatatg aaatactaaa acaaacaaac aaacaaaaaa
2821 ccagaatgca ttgtatagga ttgcatgtga agtcttttct actgaatcta tatttccatt
2881 tgtaagtgat tttaagttaa catatgaagg cagggaaatg attacctttc cagtaaaaag
2941 tatagataat ttaattaact tagtgacacc accaagtgtt ttgatataac taaatttgtg
3001 gtaataagac tgtctgcacc tgtattcatt gtggaacttc ctctttcatt ggaaactttc
3061 ttactcaaga atgacggcag tattgttttc ttatatgtgc aatgaagtgg aatgataaac
3121 agtatgcctt taatttatat gtgttcttgt tctgatgttg tttcctgaaa tgatttttct
3181 tcctaactgt ggttttcggg tatgcaagcc taaatctttg tacactttgt ctcacagaat
3241 agttctgagg ctccatgaca gggttttgtc attgttgatg ttattgttgc ttcgttttat
3301 aaaaaagcca aaattttttt ttccaatcca aacgttcacc tgtttccttt cctcaagcta
3361 taccagtgta ataccagtta ccctgtggat ccatttaata tgttatcccc actaattaat
3421 tttcgtatat tatttccaat atttggaaag ctctttatag ccatttggta tttcctatta
3481 cccacctcct attttaaata tttatcagtc taaacttgtg cagtgtagta aacatgcaag
3541 ttgttatgat tgagctgtat taccataagt agaattttaa gtaaactggt gaatttgggc
3601 catagatgtt tttgcttttt gtttgatttt tttttacaag ctaactgtta gaggtataca
3661 tttatttatc tgttgtacag atttgattat gattttaatg tttgaaagat tgcacttgtt
3721 tgcttttact atatgtgggg taaaatatat tttctgttca cagtatatga aaatatggag
3781 taatttaaac agtaaataaa cattctgtgg atgcttaaaa aaaaaaaaaa aaaaaaaaaa
3841 aaaaaaaaaa aaaaaaaaaa aaaaagaaaa aaaaaaaaaa aaa
//