LOCUS BC063282 5711 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens EPH receptor A3, mRNA (cDNA clone MGC:71556
IMAGE:30347891), complete cds.
ACCESSION BC063282
VERSION BC063282.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5711)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5711)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32967313.
FEATURES Location/Qualifiers
source 1..5711
/db_xref="H-InvDB:HIT000260803"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71556 IMAGE:30347891"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5711
/gene="EPHA3"
/gene_synonym="HEK"
/gene_synonym="HEK4"
/db_xref="GeneID:2042"
/db_xref="HGNC:HGNC:3387"
/db_xref="MIM:179611"
CDS 130..3081
/gene="EPHA3"
/gene_synonym="HEK"
/gene_synonym="HEK4"
/codon_start=1
/product="EPH receptor A3"
/protein_id="AAH63282.1"
/db_xref="GeneID:2042"
/db_xref="HGNC:HGNC:3387"
/db_xref="MIM:179611"
/translation="MDCQLSILLLLSCSVLDSFGELIPQPSNEVNLLDSKTIQGELGW
ISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFT
LRDCNSIPLVLGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDR
ILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPM
DSQSLVEVRGSCVNNSKEEDPPRMYCSTEGEWLVPIGKCSCNAGYEERGFMCQACRPG
FYKALDGNMKCAKCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVIS
NINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNT
TVTVTDLLAHTNYTFEIDAVNGVSELSSPPRQFAAVSITTNQAAPSPVLTIKKDRTSR
NSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARGTNVTISSLKPDTIYVFQ
IRARTAAGYGTNSRKFEFETSPDSFSISGESSQVVMIAISAAVAIILLTVVIYVLIGR
FCGYKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISID
KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI
IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM
GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY
RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQL
MLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFR
TTGDWLNGVWTAHCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKAL
ETQSKNGPVPV"
BASE COUNT 1727 a 1119 c 1171 g 1694 t
ORIGIN
1 gagtgtcaaa cttgacatca gcctgcgagc ggagcatggt aacttctcca gcaatcagag
61 cgctccccct cacatcagtg gcatgcttca tggagatatg ctcctctcac tgccctctgc
121 accagcaaca tggattgtca gctctccatc ctcctccttc tcagctgctc tgttctcgac
181 agcttcgggg aactgattcc gcagccttcc aatgaagtca atctactgga ttcaaaaaca
241 attcaagggg agctgggctg gatctcttat ccatcacatg ggtgggaaga gatcagtggt
301 gtggatgaac attacacacc catcaggact taccaggtgt gcaatgtcat ggaccacagt
361 caaaacaatt ggctgagaac aaactgggtc cccaggaact cagctcagaa gatttatgtg
421 gagctcaagt tcactctacg agactgcaat agcattccat tggttttagg aacttgcaag
481 gagacattca acctgtacta catggagtct gatgatgatc atggggtgaa atttcgagag
541 catcagttta caaagattga caccattgca gctgatgaaa gtttcactca aatggatctt
601 ggggaccgta ttctgaagct caacactgag attagagaag taggtcctgt caacaagaag
661 ggattttatt tggcatttca agatgttggt gcttgtgttg ccttggtgtc tgtgagagta
721 tacttcaaaa agtgcccatt tacagtgaag aatctggcta tgtttccaga cacggtaccc
781 atggactccc agtccctggt ggaggttaga gggtcttgtg tcaacaattc taaggaggaa
841 gatcctccaa ggatgtactg cagtacagaa ggcgaatggc ttgtacccat tggcaagtgt
901 tcctgcaatg ctggctatga agaaagaggt tttatgtgcc aagcttgtcg accaggtttc
961 tacaaggcat tggatggtaa tatgaagtgt gctaagtgcc cgcctcacag ttctactcag
1021 gaagatggtt caatgaactg caggtgtgag aataattact tccgggcaga caaagaccct
1081 ccatccatgg cttgtacccg acctccatct tcaccaagaa atgttatctc taatataaac
1141 gagacctcag ttatcctgga ctggagttgg cccctggaca caggaggccg gaaagatgtt
1201 accttcaaca tcatatgtaa aaaatgtggg tggaatataa aacagtgtga gccatgcagc
1261 ccaaatgtcc gcttcctccc tcgacagttt ggactcacca acaccacggt gacagtgaca
1321 gaccttctgg cacatactaa ctacaccttt gagattgatg ccgttaatgg ggtgtcagag
1381 ctgagctccc caccaagaca gtttgctgcg gtcagcatca caactaatca ggctgctcca
1441 tcacctgtcc tgacgattaa gaaagatcgg acctccagaa atagcatctc tttgtcctgg
1501 caagaacctg aacatcctaa tgggatcata ttggactacg aggtcaaata ctatgaaaag
1561 caggaacaag aaacaagtta taccattctg agggcaagag gcacaaatgt taccatcagt
1621 agcctcaagc ctgacactat atacgtattc caaatccgag cccgaacagc cgctggatat
1681 gggacgaaca gccgcaagtt tgagtttgaa actagtccag actctttctc catctctggt
1741 gaaagtagcc aagtggtcat gatcgccatt tcagcggcag tagcaattat tctcctcact
1801 gttgtcatct atgttttgat tgggaggttc tgtggctata agtcaaaaca tggggcagat
1861 gaaaaaagac ttcattttgg caatgggcat ttaaaacttc caggtctcag gacttatgtt
1921 gacccacata catatgaaga ccctacccaa actgttcatg agtttgccaa ggaattggat
1981 gccaccaaca tatccattga taaagttgtt ggagcaggtg aatttggaga ggtgtgcagt
2041 ggtcgcttaa aacttccttc aaaaaaagag atttcagtgg ccattaagac cctgaaagtt
2101 ggctacacag aaaagcagag gagagacttc ctgggagaag caagcattat gggacagttt
2161 gaccacccca atatcattcg actggaagga gttgttacca aaagtaagcc agttatgatt
2221 gtcacagaat acatggagaa tggttccttg gatagtttcc tacgtaaaca cgatgcccag
2281 tttactgtca ttcagctagt ggggatgctt cgagggatag catctggcat gaagtacctg
2341 tcagacatgg gctatgttca ccgagacctc gctgctcgga acatcttgat caacagtaac
2401 ttggtgtgta aggtttctga tttcggactt tcgcgtgtcc tggaggatga cccagaagct
2461 gcttatacaa caagaggagg gaagatccca atcaggtgga catcaccaga agctatagcc
2521 taccgcaagt tcacgtcagc cagcgatgta tggagttatg ggattgttct ctgggaggtg
2581 atgtcttatg gagagagacc atactgggag atgtccaatc aggatgtaat taaagctgta
2641 gatgagggct atcgactgcc accccccatg gactgcccag ctgccttgta tcagctgatg
2701 ctggactgct ggcagaaaga caggaacaac agacccaagt ttgagcagat tgttagtatt
2761 ctggacaagc ttatccggaa tcccggcagc ctgaagatca tcaccagtgc agccgcaagg
2821 ccatcaaacc ttcttctgga ccaaagcaat gtggatatca ctaccttccg cacaacaggt
2881 gactggctta atggtgtctg gacagcacac tgcaaggaaa tcttcacggg tgtggagtac
2941 agttcttgtg acacaatagc caagatttcc acagatgaca tgaaaaaggt tggtgtcacc
3001 gtggttgggc cacagaagaa gatcatcagt agcattaaag ctctagaaac gcaatcaaag
3061 aatggcccag ttcccgtgta aagcacggga cggaagtgct tctggacgga agtggtggct
3121 gtggaaggcg tagcatcatc ctgcagacag acaataattc tggagatact ggtggaagtt
3181 ccaagtccaa taagacactc aaatatgagt acaaatgcct taaaatggaa ttgaaaaact
3241 ctttattttc ccctatcatt tattggatgg gtgggtgggg tatttttttg taattgcttt
3301 tttaaatatt agttaatgga ttaaatttaa ttcttcagcg taaaatggtg aagaactagc
3361 atatagccat tgatcataaa ctgactatca taaaatcaaa acaagtgaaa taacaaaatg
3421 gacatggtgg ctttgtttag gtagagccac aaaagaaaag acttgtaata tttttatata
3481 cagaggaaat ctgtaacagg tattttgttt cttttaaagc aagcaacaca gaggaattta
3541 tacctcaaac tatctggcca tatttactac cttatcactg cattattctc ttttatctgt
3601 ttaaagcata tagagatgaa gtttgtagtt gttttaagta ctacacattt ttaaattgtt
3661 agcttcctta agtatatcat gtaaagaaat gtcttaattt ttgaaaaaag tacatattta
3721 ttttcttttg aattgttttt attgttttct atttatgcct tgatgattta atatggattt
3781 gttacagcca agtgccaaat gctctctcaa attgtcagca atttaactag acacagataa
3841 taatgggttt ctttcagatt ttttgaacca tccacttaca tatattttta aaaaatgaaa
3901 tccttttcct gttcatacac taaccaaatc tctcaaatct gttatcccaa tcattgttgc
3961 ctctccgttt attataaact gtatgctcac aacttagtgt aatataccag cttgtatgca
4021 atggattttc aaccagataa catacctttc ctgctctggt gcttagagac tatcaactcc
4081 ctcctttagt gaaggagccg tgttagagct tccgagaata gctccactgg agagaagtgg
4141 aatcctatat agaatgctgc actaattgac aacacagcct ataggccaat gcatgagtaa
4201 aaaaaaaaac aattactggc tcactggctt tgaaaagtca cttactattg ttgctgaaac
4261 ttgctgagct gtttatagag aatgatgata acagaacttt tcctctgtat cactggtgtt
4321 taggtgaatt aattaaacat tgtgatcatt agtaccaggt attattatct ttaagagtct
4381 tccacttcaa tgcacatggt gcagttttgg tgtgtaactt agaaggattg aacttctttg
4441 aatttactgg acataacatt ttcagaatag ttggtcatct agcaaccgcc tcaaaatgtg
4501 taagcaggag agaaatttct catcacaggg atttagactt actattacat aaaggctaac
4561 tatgagcttg ctcattaatt ttgaaaagat gtacctggtg gatatctagc tagtaatata
4621 ttctgaagca acattttagc tctattgata ctctttctaa tgctgatatg atcttgagta
4681 taagaaatgc atatgtcact agaatggata aaataatgct gcaaacttaa tgttcttatg
4741 caaaatggaa cgctaatgaa acacagctta caatcgcaaa tcaaaactca caagtgctca
4801 tctgttgtag atttagtgta ataagactta gattgtgctc cttcggatat gattgtttct
4861 caaatcttgg caatattcct tagtcaaatc aggctactag aattctgtat tggatatata
4921 agagcatgaa atttttaaaa atacacttgt gattataaaa ttaatcacaa atttcactta
4981 tacctgctat cagcagctag aaaacatttt ttttttaaat caagtatttt gtgtttggaa
5041 tgttagaatg agatctgaat gtggtttcaa tctaattttt tcccagacta ctattttctt
5101 ttttaggtac tattctgagc atactcaaca aaacccatgc atttcataaa ctaatagaag
5161 ttgaggattg ttgaatctat ttcacttatt ttggctgtgg tttccatctg aaagtagagg
5221 ttgtatacac catatactgt tcttcatttt attaatattt ttctccttga cctctcataa
5281 atttacttta cacaattctt accctgtaca tatgtaaaca taagtgtacg attcttaacc
5341 atggagtaga ggtactagaa tgcttacggc catctctttg tacaggaact gcattgactt
5401 tcagtaaaca taaagccaca actcctacat gatgttatgt accatatgat ctgttttgta
5461 tcttaaattt gatttacata tattatttat ttctggtaac tcactcagtt tatgctgtgc
5521 taaatatcaa tcaagccatg tataaatgtg atatgattgg caatatgtgt ttactttaaa
5581 cttgtctttt caaaatatta ctcagtttat gttgtacaat gtagatggcc tcttactaat
5641 gtaaaatgat ttgtagtgga aacatttata tttttataat aaacataatg aaaataaaaa
5701 aaaaaaaaaa a
//