LOCUS BC063279 4211 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens SAM and SH3 domain containing 1, mRNA (cDNA clone
IMAGE:30346140), partial cds.
ACCESSION BC063279
VERSION BC063279.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4211)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: i Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308024.
FEATURES Location/Qualifiers
source 1..4211
/db_xref="H-InvDB:HIT000260800"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30346140"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescript"
gene <1..4211
/gene="SASH1"
/gene_synonym="dJ323M4.1"
/gene_synonym="KIAA0790"
/db_xref="GeneID:23328"
/db_xref="MIM:607955"
CDS <1..3688
/gene="SASH1"
/gene_synonym="dJ323M4.1"
/gene_synonym="KIAA0790"
/codon_start=2
/product="SASH1 protein"
/protein_id="AAH63279.1"
/db_xref="GeneID:23328"
/db_xref="MIM:607955"
/translation="EPEPAPEPEPEPKPGAGTSEAFSRLWTDVMGILDGSLGNIDDLA
QQYADYYNTCFSDVCERMEELRKRRVSQDLEVEKPDASPTSLQLRSQIEESLGFCSAV
STPEVERKNPLHKSNSEDSSVGKGDWKKKNKYFWQNFRKNQKGIMRQTSKGEDVGYVA
SEITMSDEERIQLMMMVKEKMITIEEALARLMEYEAQHRQSAALDPADWPDGSYPTFD
GSSNCNSREQSDDETEESVKFKRLHKLVNSTRRVRKKLIRVEEMKKPSTEGGEEHVFE
NSPVLDERSALYSGVHKKPLFFDGSPEKPPEDDSDSLTTSPSSSSLDTWGAGRKLVKT
FSKGESRGLIKPPKKMGTFFSYPEEEKAQKVSRSLTEGEMKKGLGSLSHGRTCSFGGF
DLTNRSLHVGSNNSDPMGKEGDFVYKEVIKSPTASRISLGKKVKSVKETMRKRMSKKY
SSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSGQSSMSGQTVS
TTDSSTSNRESVKSEDGDDEEPPYRGPFCGRARVHTDFTPSPYDTDSLKLKKGDIIDI
ISKPPMGTWMGLLNNKVGTFKFIYVDVLSEDEEKPKRPTRRRRKGRPPQPKSVEDLLD
RINLKEHMPTFLFNGYEDLDTFKLLEEEDLDELNIRDPEHRAVLLTAVELLQEYDSNS
DQSGSQEKLLVDSQGLSGCSPRDSGCYESSENLENGKTRKASLLSAKSSTEPSLKSFS
RNQLGNYPTLPLMKSGDALKQGQEEGRLGGGLAPDTSKSCDPPGVTGLNKNRRSLPVS
ICRSCETLEGPQTVDTWPRSHSLDDLQVEPGAEQDVPTEVTEPPPQIVPEVPQKTTAS
STKAQPLERDSAVDNALLLTQSKRFSEPQKLTTKKLEGSIAASGRGLSPPQCLPRNYD
AQPPGAKHGLARTPLEGHRKGHEFEGTHHPLGTKEGVDAEQRMQPKIPSQPPPVPAKK
SRERLANGLHPVPMGPSGALPSPDAPCLPVKRGSPASPTSPSDCPPALAPRPLSGQAP
GSPPSTRPPPWLSELPENTSLQEHGVKLGPALTRKVSCARGVDLETLTENKLHAEGID
LTEEPYSDKHGRCGIPEALVQRYAEDLDQPERDVAANMDQIRVKQLRKQHRMAIPSGG
LTEICRKPVSPGCISSVSDWLISIGLPMYAGTLSTAGFSTLSQVPSLSHTCLQEAGIT
EERHIRKLLSAARLFKLPPGPEAM"
misc_feature 1853..2035
/gene="SASH1"
/gene_synonym="dJ323M4.1"
/gene_synonym="KIAA0790"
/note="SAM; Region: Sterile alpha motif"
/db_xref="CDD:smart00454"
misc_feature 3464..3661
/gene="SASH1"
/gene_synonym="dJ323M4.1"
/gene_synonym="KIAA0790"
/note="SAM; Region: Sterile alpha motif"
/db_xref="CDD:smart00454"
BASE COUNT 1121 a 1156 c 1134 g 800 t
ORIGIN
1 ggagcccgag cccgcgccgg agccggaacc ggagcccaag ccgggtgctg gcacatccga
61 ggcgttctcc cgactctgga ccgacgtgat gggtatcctg gacggttcac tgggaaacat
121 cgatgacctg gcgcagcagt atgcagatta ttacaacacc tgtttctccg acgtgtgcga
181 gaggatggag gagctgcgga aacggcgggt ttcccaggac ctggaagtgg agaaacccga
241 tgctagcccc acgtcacttc agctgcggtc ccagatcgaa gagtcgcttg gcttctgtag
301 cgccgtgtca accccagaag tggaaagaaa gaaccctctt cataaatcaa actcagaaga
361 cagctctgta ggaaaaggag actggaagaa gaaaaataag tatttctggc agaacttccg
421 aaagaaccag aaagggataa tgagacagac ttcaaaagga gaagacgttg gttatgttgc
481 cagtgaaata acgatgagcg atgaggagcg gattcagcta atgatgatgg tcaaagaaaa
541 gatgatcaca attgaggaag cacttgctag gctcatggaa tacgaggccc agcaccggca
601 gtcggctgcc ctggaccctg ctgactggcc agatggttct tacccaacgt ttgatggctc
661 atcaaactgc aattcaagag aacaatcgga tgatgagact gaggagtcgg tgaagtttaa
721 gaggttacac aagctggtaa actccactcg cagagtcaga aagaaactaa ttagggtgga
781 agaaatgaaa aaacccagca ctgaaggtgg ggaggagcac gtgtttgaga attcgccggt
841 cctggatgaa cggtccgccc tctactctgg cgtgcacaag aagccccttt tctttgatgg
901 ctctcctgag aaacctcccg aagatgactc agactctctc accacgtctc catcctccag
961 cagcctggac acctgggggg ctggccggaa gttggtcaaa accttcagca aaggagagag
1021 ccggggcctg attaagcccc ccaagaagat ggggacattc ttctcctacc cagaagaaga
1081 aaaggcccag aaagtgtccc gctccctcac cgagggggag atgaagaagg gtctcgggtc
1141 cctaagccac gggagaacct gcagttttgg aggatttgac ttgacgaatc gctctctgca
1201 cgttggcagt aataattctg acccaatggg taaagaagga gactttgtgt acaaagaagt
1261 catcaaatca cctactgcct ctcgcatctc tcttgggaaa aaggtgaaat cagtgaaaga
1321 gacgatgaga aagagaatgt ctaaaaaata cagcagctct gtctctgagc aggactcggg
1381 ccttgatgga atgcctggct cccctccgcc ttcacagccc gaccccgaac acttggacaa
1441 gcccaagctc aaggccgggg gttctgtaga aagtcttcgc agttctctca gtgggcagag
1501 ctccatgagc ggtcaaacag tgagcaccac tgattcctca accagcaacc gggaaagcgt
1561 caagtcggaa gatggggatg acgaagagcc gccttaccga ggcccgttct gcgggcgtgc
1621 cagggtgcac accgacttca cccccagtcc ctatgacaca gactcactca agctcaagaa
1681 aggagatatc atcgatataa tcagcaagcc acccatgggg acctggatgg gcctgctgaa
1741 caacaaagtc ggcacgttca agttcatcta cgtggacgtg ctcagtgaag acgaggagaa
1801 acccaaacgc cccaccagga ggcgtcggaa aggacgacca ccccagccca agtctgtgga
1861 ggatctcctg gatcggatta acctaaaaga gcacatgccc actttcctgt tcaatggata
1921 tgaagatttg gacaccttta agctgctgga ggaggaagac ttggatgagt taaatatcag
1981 ggacccggaa cacagagctg ttctcttgac agcagtggag ctgttacaag agtatgacag
2041 taacagcgac cagtcaggat cccaggagaa gctgctcgtt gacagccagg gcctgagtgg
2101 atgctcaccc cgagactcag gatgctacga aagcagtgag aacctggaaa acggcaagac
2161 tcggaaagct agcctcctat ctgccaagtc atccaccgag cccagcttga agtcttttag
2221 cagaaaccag ttgggcaatt acccaacatt gcctttaatg aaatcagggg atgcactgaa
2281 gcagggacag gaggagggca ggctgggtgg tggccttgcc ccagacacgt ccaagagctg
2341 tgacccacct ggtgtgactg gtttgaataa aaaccgaaga agcctcccag tttccatctg
2401 ccggagctgt gagaccctgg agggccccca gactgtggac acttggcccc gatcccattc
2461 cctggatgac cttcaagtgg agcctggtgc tgagcaagac gtgcctaccg aggtgacaga
2521 accgccccct cagattgtac ctgaagtgcc acagaagacg accgcctctt ccacgaaggc
2581 ccagcccctg gagcgagact ctgctgtcga caatgcattg ctactgaccc aaagcaagag
2641 attttctgaa cctcagaaat tgacaactaa gaaactggag ggctcaatcg cagcctctgg
2701 tcgcggcctg tcaccccctc agtgtttgcc cagaaactat gatgctcagc ctcctggagc
2761 taaacacggt ttagcaagga cgcctctgga gggccacaga aaaggacacg agtttgaagg
2821 aacacaccat cccctgggca ccaaagaagg ggtagatgct gagcagagaa tgcagcccaa
2881 aattccatca cagcctccac ctgttcctgc caaaaagagc agagaacgcc ttgctaacgg
2941 actccaccct gttcccatgg gccccagtgg ggccctcccc agtcccgatg cgccatgcct
3001 gccagtgaaa aggggcagcc ccgccagccc caccagccct agcgactgtc ccccagcact
3061 ggctcccagg cctctctcag ggcaggcgcc tggcagccca ccaagcacaa ggccgccccc
3121 ctggctctca gagctccccg agaacacaag cctccaggag cacggtgtga agctgggccc
3181 ggctttgacc aggaaggtct cctgtgcccg gggagtggat ctagaaacgc tcactgaaaa
3241 caagctgcac gctgaaggca tcgatctcac ggaggagccg tattctgata agcatggccg
3301 ctgtgggatt cctgaagccc tggtgcagag atacgcagag gacttggatc agcccgagcg
3361 ggacgtcgcc gccaacatgg accagatccg ggtgaagcag cttcggaagc agcaccgcat
3421 ggcgattcca agtggtggac tcacggaaat ctgccgaaag cccgtctctc ctgggtgcat
3481 ttcgtctgtg tcagattggc tcatttccat cggtctgccc atgtacgccg gcaccctctc
3541 caccgcgggc ttcagcacac tgagccaagt gccttctctg tctcacactt gccttcagga
3601 ggccggcatc acagaggaga gacacataag aaagctccta tctgcagcca gactcttcaa
3661 actgccgcca ggccctgagg ccatgtagcc aggcccggaa tgggcctctc tggacaagag
3721 ccaccctttc actgtgcata tgatgctgat gcaattcctc catcatctct ggacgtgcag
3781 accagatcca gaagaaaggc ctggcgtgtg gccaaacagc gtgaaacctt ggcacaggac
3841 tgaggatcct ctcctccaga aaagccccct cgaggaaata aattagtgcg gttctctttg
3901 acctccaaag acaagacaag cacttatttt tattttcaga agacaaaaga accaagatgc
3961 caactggctg cgaatgctct atctccagtc tgtctctgtg tactggtaga ggctgggagg
4021 agtagggggc agcctgttcc atttctgata gtgcccttgc tcttctgtct gtcatcttgc
4081 aggatgcccg agggccagat gggcttagct aggccaaagt aacagactca agagttattg
4141 tacattactg accacgctca tttgttcaaa agttagaaca tctggctgca ccagaaaaaa
4201 aaaaaaaaaa a
//