LOCUS BC063241 2986 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sideroflexin 1, mRNA (cDNA clone MGC:60019
IMAGE:6187994), complete cds.
ACCESSION BC063241
VERSION BC063241.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2986)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2986)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255158.
FEATURES Location/Qualifiers
source 1..2986
/db_xref="H-InvDB:HIT000260791"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60019 IMAGE:6187994"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2986
/gene="SFXN1"
/gene_synonym="FLJ12876"
/db_xref="GeneID:94081"
/db_xref="HGNC:HGNC:16085"
CDS 70..1038
/gene="SFXN1"
/gene_synonym="FLJ12876"
/codon_start=1
/product="sideroflexin 1"
/protein_id="AAH63241.1"
/db_xref="GeneID:94081"
/db_xref="HGNC:HGNC:16085"
/translation="MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQL
ESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMT
ITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVA
TALGLNALTKHVSPLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGES
ANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCL
VFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL"
BASE COUNT 891 a 607 c 631 g 857 t
ORIGIN
1 cggcggaggc tgcactgagc gggacctgcg agcagcgcgg gcggcagccc gggggaagcg
61 tccgggacca tgtctggaga actaccacca aacattaaca tcaaggaacc tcgatgggat
121 caaagcactt tcattggacg agccaatcat ttcttcactg taactgaccc caggaacatt
181 ctgttaacca acgaacaact cgagagtgcg agaaaaatag tacatgatta caggcaagga
241 attgttcctc ctggtcttac agaaaatgaa ttgtggagag caaagtacat ctatgattca
301 gcttttcatc ctgacactgg tgagaagatg attttgatag gaagaatgtc agcccaggtt
361 cccatgaaca tgaccatcac aggttgtatg atgacgtttt acaggactac gccggctgtg
421 ctgttctggc agtggattaa ccagtccttc aatgccgtcg tcaattacac caacagaagt
481 ggagacgcac ccctcactgt caatgagttg ggaacagctt acgtttctgc aacaactggt
541 gccgtagcaa cagctctagg actcaatgca ttgaccaagc atgtctcacc actgatagga
601 cgttttgttc cctttgctgc cgtagctgct gctaattgca ttaatattcc attaatgagg
661 caaagggaac tcaaagttgg cattcccgtc acggatgaga atgggaaccg cttgggggag
721 tcggcgaacg ctgcgaaaca agccatcacg caagttgtcg tgtccaggat tctcatggca
781 gcccctggca tggccatccc tccattcatt atgaacactt tggaaaagaa agcctttttg
841 aagaggttcc catggatgag tgcacccatt caagttgggt tagttggctt ctgtttggtg
901 tttgctacac ccctgtgttg tgccctgttt cctcagaaaa gttccatgtc tgtgacaagc
961 ttggaggccg agttgcaagc taagatccaa gagagccatc ctgaattgcg acgcgtgtac
1021 ttcaataagg gattgtaaag cagggaggaa acctctgcag ctcattctgc cactgcaaag
1081 ctggtgtagc catgctggtg agaaaaatcc tgttcaacct gggttctccc agttacggaa
1141 accttttaaa gatccacatt agccttttag aataaagctg ctactttaac agagcacctg
1201 gcgtgggcca agtgcctgat actcccttac actgaatcat gttatgattt atagaaatac
1261 ctttcctgta gcttttatag tcattgtttt tcaaagacga tataccagcc ctcacccagg
1321 ttttaaaaaa gcactggtag gcatagaata ggtgctcagt atatggtcag taaatgttct
1381 attgattatc aatcagtgaa aaaagaaatc tgtttaaaat actgaatttt catctcactc
1441 ccattgcaaa tcaaggagat ctcagcagtg aactgggaaa atacaaaagc tctgggctaa
1501 tctataaaaa cttaccctga aatattaagg gcagtttgct tctagtttgg ggattgcgct
1561 agcccaatga aggtgatgaa gcttttggat ttggagggta aaagctcctt cacacccctt
1621 ccaaaagtca gtcacagacc actgcaacat gccttccctg ctggatcatt atatacattc
1681 agattgtgag tggattgcct tggttgactt ttaatttatt gttttttgtt cttataaaga
1741 tgataatctt accttgcagt tattgacttt atattcaatt atttacatca aataatgaaa
1801 taactgaaat gtacaaatgt caaattttgg aagtatattc aataccaatg ctgtatgagt
1861 gggctgaatc cagttcattg tttttttttt ggtaagaagt gagactacag ttccagctac
1921 ctacatgtct tttcttgtca tccttataga tctctttggc tttcagaaag atacagtgat
1981 aatgtgtgta tgaatcagtc acaatgaatt ttacttgaat attgtatgtt gcattccact
2041 tcatttgaaa ataatgaaac catgtaccac tgtttacatc atctgtagtg atttcataga
2101 taatatattt aatatgacag attatgtttc aactctgtag atgtttaacg tcatagacag
2161 ttggccctct gtatccgtga gctctatatc tgtgaattca accaagtttg gatggaaaat
2221 tttttttttt tttttttttt ttttgagacg gagtctcgct ctgtcaccca ggctggagtg
2281 cagtggcgta gtctcggctc actgcaagct ccgcctcctg ggttcacgcc gttctcctgc
2341 ctcagcctct ctgagaagct gggactacag gcgcccgcca ccacgcccgg ctaatttttt
2401 tgtattttta gtagagacgg ggtttcactg tggtctcgat ctcctgacct cgtgatccgc
2461 ccgccttggc ctcccaaggt gctgggatta caagcgtgag ccaccgcacc cggcctgaaa
2521 atattttcta aaaagataaa aaatatacat aacgatgaaa aataatacaa atttaaaaac
2581 caatacagta taacaactat ttacatagtg cttacattgt attaggtgtt ataagcaatc
2641 tagagatgat ttagcaagta tacaggagga tgtgcctagg ttatatgcaa atactgtgcc
2701 attttatatc aggaacttga gcatctgcag atattggtat cggagggcgg tcctggaacc
2761 aagcatccac ggatactgag gggtgacatt tcatgaagtg tagatcattg tattcagaga
2821 ttgtaaatga aaaaaatata gaaactattt agttttggta gatttttttt ctgacaatgt
2881 gaccagactg aatttcctca taaagaaaaa atggcgaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//