LOCUS BC063129 1820 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens amylase, alpha 1A (salivary), mRNA (cDNA clone
MGC:72069 IMAGE:30327425), complete cds.
ACCESSION BC063129
VERSION BC063129.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1820)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1820)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56549661.
FEATURES Location/Qualifiers
source 1..1820
/db_xref="H-InvDB:HIT000260776_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:72069 IMAGE:30327425"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1820
/gene="AMY1A"
/gene_synonym="AMY1B"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
CDS 225..1760
/gene="AMY1A"
/gene_synonym="AMY1B"
/codon_start=1
/product="amylase, alpha 1A (salivary)"
/protein_id="AAH63129.1"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
/translation="MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECE
RYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCN
NVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGS
GDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMW
PGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAK
LGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDAR
LYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTT
CGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWT
FSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAE
SKL"
BASE COUNT 540 a 315 c 439 g 526 t
ORIGIN
1 gggggattta tctagaggct gggaagggct cctgaaccag ttgtttccgt cttgtcggtc
61 tgtcagggtt ggaaagtcca agccatagga cccagtttcc tttcttagct tacgttatct
121 accagagcac cgtgggctgt tacttgcctt gagttggaag cggttcgcat ttataccgga
181 atataaatag tttctggaaa ggacactgac aacttcaaag caaaatgaag ctcttttggt
241 tgcttttcac cattgggttc tgctgggctc agtattcctc aaatacacaa caaggacgaa
301 catctattgt tcatctgttt gaatggcgat gggttgatat tgctcttgaa tgtgagcgat
361 atttagctcc caagggattt ggaggggttc aggtctctcc accaaatgaa aatgttgcca
421 ttcacaaccc tttcagacct tggtgggaaa gataccaacc agttagctat aaattatgca
481 caagatctgg aaatgaagat gaatttagaa acatggtgac tagatgcaac aatgttgggg
541 ttcgtattta tgtggatgct gtaattaatc atatgtgtgg taatgctgtg agtgcaggaa
601 caagcagtac ctgtggaagt tacttcaacc ctggaagtag ggactttcca gcagtcccat
661 attctggatg ggattttaat gatggtaaat gtaaaactgg aagtggagat atcgagaact
721 ataatgatgc tactcaggtc agagattgtc gtctgtctgg tcttctcgat cttgcactgg
781 ggaaggatta tgtgcgttct aagattgccg aatatatgaa ccatctcatt gacattggtg
841 ttgcagggtt cagaattgat gcttccaagc acatgtggcc tggagacata aaggcaattt
901 tggacaaact gcataatcta aacagtaact ggttcccgga aggtagtaaa cctttcattt
961 accaggaggt aattgatctg ggtggtgagc caattaaaag cagtgactac tttggtaatg
1021 gccgggtgac agaattcaag tatggtgcaa aactcggcac agttattcgc aagtggaatg
1081 gagagaagat gtcttactta aagaactggg gagaaggttg gggtttcatg ccttctgaca
1141 gagcgcttgt ctttgtggat aaccatgaca atcaacgagg acatggcgct ggaggagcct
1201 ctatacttac cttctgggat gctaggctgt acaaaatggc agttggattt atgcttgctc
1261 atccttatgg atttacacga gtaatgtcaa gctaccgttg gccaagatat tttgaaaatg
1321 gaaaagatgt taatgattgg gttgggccac caaatgataa tggagtaact aaagaagtta
1381 ctattaatcc ggacactact tgtggcaatg actgggtctg tgaacatcga tggcgccaaa
1441 taaggaacat ggttaatttc cgcaatgtag tggatggcca gccttttaca aactggtatg
1501 ataatgggag caaccaagtg gcttttggga gaggaaacag aggattcatt gttttcaaca
1561 atgatgactg gacattttct ttaactttgc aaactggtct tcctgctggc acatactgtg
1621 atgtcatttc tggagataaa attaatggca actgcacagg cattaaaatc tacgtttctg
1681 atgatggcaa agctcatttt tctattagta actctgctga agatccattt attgcaattc
1741 atgctgaatc taaattgtaa aatttaaaat taaatgcaaa tccgcaaagc ataaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa
//