LOCUS BC063122 2601 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 9, mRNA (cDNA clone
MGC:71972 IMAGE:30370826), complete cds.
ACCESSION BC063122
VERSION BC063122.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2601)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2601)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: b Column: 3.
FEATURES Location/Qualifiers
source 1..2601
/db_xref="H-InvDB:HIT000260769"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71972 IMAGE:30370826"
/tissue_type="Skin and meninges pool- skin, dura matter,
pia matter, choroid plexus."
/clone_lib="NIH_MGC_186"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2601
/gene="CXCL9"
/gene_synonym="crg-10"
/gene_synonym="Humig"
/gene_synonym="SCYB9"
/db_xref="GeneID:4283"
/db_xref="HGNC:HGNC:7098"
/db_xref="MIM:601704"
CDS 66..443
/gene="CXCL9"
/gene_synonym="crg-10"
/gene_synonym="Humig"
/gene_synonym="SCYB9"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 9"
/protein_id="AAH63122.1"
/db_xref="GeneID:4283"
/db_xref="HGNC:HGNC:7098"
/db_xref="MIM:601704"
/translation="MKKSGVLFLLGIILLVLIGVQGTPVVRKGRCSCISTNQGTIHLQ
SLKDLKQFAPSPSCEKIEIIATLKNGVQTCLNPDSADVKELIKKWEKQVSQKKKQKNG
KKHQKKKVLKVRKSQRSRQKKTT"
BASE COUNT 795 a 585 c 464 g 757 t
ORIGIN
1 gggaaaaaga atttctcagg ctcaaaatcc aatacaggag tgacttggaa ctccattcta
61 tcactatgaa gaaaagtggt gttcttttcc tcttgggcat catcttgctg gttctgattg
121 gagtgcaagg aaccccagta gtgagaaagg gtcgctgttc ctgcatcagc accaaccaag
181 ggactatcca cctacaatcc ttgaaagacc ttaaacaatt tgccccaagc ccttcctgcg
241 agaaaattga aatcattgct acactgaaga atggagttca aacatgtcta aacccagatt
301 cagcagatgt gaaggaactg attaaaaagt gggagaaaca ggtcagccaa aagaaaaagc
361 aaaagaatgg gaaaaaacat caaaaaaaga aagttctgaa agttcgaaaa tctcaacgtt
421 ctcgtcaaaa gaagactaca taagagacca cttcaccaat aagtattctg tgttaaaaat
481 gttctatttt aattataccg ctatcattcc aaaggaggat ggcatataat acaaaggctt
541 attaatttga ctagaaaatt taaaacatta ctctgaaatt gtaactaaag ttagaaagtt
601 gattttaaga atccaaacgt taagaattgt taaaggctat gattgtcttt gttcttctac
661 cacccaccag ttgaatttca tcatgcttaa ggccatgatt ttagcaatac ccatgtctac
721 acagatgttc acccaaccac atcccactca caacagctgc ctggaagagc agccctaggc
781 ttccacgtac tgcagcctcc agagagtatc tgaggcacat gtcagcaagt cctaagcctg
841 ttagcatgct ggtgagccaa gcagtttgaa attgagctgg acctcaccaa gctgctgtgg
901 ccatcaacct ctgtatttga atcagcctac aggcctcaca cacaatgtgt ctgagagatt
961 catgctgatt gttattgggt atcaccactg gagatcacca gtgtgtggct ttcagagcct
1021 cctttctggc tttggaagcc atgtgattcc atcttgcccg ctcaggctga ccactttatt
1081 tctttttgtt cccctttgct tcattcaagt cagctcttct ccatcctacc acaatgcagt
1141 gcctttcttc tctccagtgc acctgtcata tgctctgatt tatctgagtc aactcctttc
1201 tcatcttgtc cccaacaccc cacagaagtg ctttcttctc ccaattcatc ctcactcagt
1261 ccagcttagt tcaagtcctg cctcttaaat aaaccttttt ggacacacaa attatcttaa
1321 aactcctgtt tcacttggtt cagtaccaca tgggtgaaca ctcaatggtt aactaattct
1381 tgggtgttta tcctatctct ccaaccagat tgtcagctcc ttgagggcaa gagccacagt
1441 atatttccct gtttcttcca cagtgcctaa taatactgtg gaactaggtt ttaataattt
1501 tttaattgat gttgttatgg gcaggatggc aaccagacca ttgtctcaga gcaggtgctg
1561 gctctttcct ggctactcca tgttggctag cctctggtaa cctcttactt attatcttca
1621 ggacactcac tacagggacc agggatgatg caacatcctt gtctttttat gacaggatgt
1681 ttgctcagct tctccaacaa taagaagcac gtggtaaaac acttgcggat attctggact
1741 gtttttaaaa aatatacagt ttaccgaaaa tcatataatc ttacaatgaa aaggacttta
1801 tagatcagcc agtgaccaac cttttcccaa ccatacaaaa attccttttc ccgaaggaaa
1861 agggctttct caataagcct cagctttcta agatctaaca agatagccac cgagatcctt
1921 atcgaaactc attttaggca aatatgagtt ttattgtccg tttacttgtt tcagagtttg
1981 tattgtgatt atcaattacc acaccatctc ccatgaagaa agggaacggt gaagtactaa
2041 gcgctagagg aagcagccaa gtcggttagt ggaagcatga ttggtgccca gttagcctct
2101 gcaggatgtg gaaacctcct tccaggggag gttcagtgaa ttgtgtagga gaggttgtct
2161 gtggccagaa tttaaaccta tactcacttt cccaaattga atcaccgctc acactgctga
2221 tgatttagag tgctgtccgg tggagatccc acccgaacgt cttatctaat catgaaactc
2281 cctagttcct tcatgtaact tccctgaaaa atctaagtgt ttcataaatt tgagagtctg
2341 tgacccactt accttgcatc tcacaggtag acagtatata actaacaacc aaagactaca
2401 tattgtcact gacacacacg ttataatcat ttattatata tatacataca tgcatacact
2461 ctcaaagcaa ataatttttc acttcaaaac agtattgact tgtatacctt gtaatttgaa
2521 atattttctt tgttaaaata gaatggtatc aataaataga ccattaatcg gaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa a
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