LOCUS BC063121 3472 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens oxysterol binding protein, mRNA (cDNA clone IMAGE:4603277), partial cds. ACCESSION BC063121 VERSION BC063121.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3472) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3472) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 51 Row: g Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4505530. FEATURES Location/Qualifiers source 1..3472 /db_xref="H-InvDB:HIT000260768" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4603277" /tissue_type="Placenta" /clone_lib="NIH_MGC_79" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene <1..3472 /gene="OSBP" /gene_synonym="OSBP1" /db_xref="GeneID:5007" /db_xref="MIM:167040" CDS <1..1263 /gene="OSBP" /gene_synonym="OSBP1" /codon_start=1 /product="OSBP protein" /protein_id="AAH63121.1" /db_xref="GeneID:5007" /db_xref="MIM:167040" /translation="GGFRSCISRRRRLMAATELRGVVGPGPAAIAALGGGGAGPPVVG GGGGRGDAGPGSGAMLQRLTEDLEYHELLDRAAKCENSLEQLCYVAAFTVSSYSTTVF RTSKPFNPLLGETFELDRLEENGYRSLCEQVSHHPPAAAHHAESKNGWTLRQEIKITS KFRGKYLSIMPLGTIHCIFHATGHHYTWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKT GDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKMECFKVQPVIGENG GDARQRGHEAEESRVMLWKRNPLPKNAENMYYFSELALTLNAWESGTAPTDSRLRPDQ RLMENGRWDEANAEKQRLEEKQRLSRKKREAEAMKATEDGTPYDPYKALWFERKKDPV TKELTHIYRGEYWECKEKQDWSSCPDIF" misc_feature 175..1230 /gene="OSBP" /gene_synonym="OSBP1" /note="Oxysterol_BP; Region: Oxysterol-binding protein" /db_xref="CDD:pfam01237" BASE COUNT 933 a 751 c 826 g 962 t ORIGIN 1 ggggggttcc ggtcttgtat ctccaggcgg cggcggctca tggcggcgac ggagctgaga 61 ggagtggtgg ggccaggccc ggcagccatt gcagcacttg gcggcggcgg cgccggtccc 121 ccagtggtgg gaggaggcgg cggccgcgga gatgcggggc caggctccgg ggccatgctt 181 cagcgcctta ctgaagatct ggaataccat gagctgttag accgagctgc aaaatgtgag 241 aattctctag aacagctctg ttatgttgca gctttcaccg tgtcctccta ctccactact 301 gtcttccgca ccagtaagcc attcaaccca ctgcttgggg agacctttga gctggaccga 361 ttagaggaga atgggtaccg atccctctgt gaacaggtga gtcatcatcc ccctgctgct 421 gcgcaccatg ctgagtccaa aaatggctgg acattgcgtc aggaaatcaa aatcaccagc 481 aagtttcgag gcaaatacct ctccattatg cccctcggta ccattcattg tattttccat 541 gcaactgggc accactacac ttggaagaaa gttaccacaa ctgtacacaa cattattgtg 601 ggcaagttgt ggatagatca gtctggcgaa attgatattg tgaatcacaa gacaggagac 661 aagtgtaatc ttaaatttgt tccttatagc tacttctctc gggatgtagc aagaaaggtg 721 acgggggaag tgacagatcc atcaggaaaa gtccactttg ctcttctggg gacgtgggat 781 gagaaaatgg aatgtttcaa agtacagcca gtcattgggg aaaatggggg tgatgctcga 841 cagagaggcc atgaagcaga ggaaagcagg gtcatgctgt ggaaaaggaa tcctttaccg 901 aagaatgcag aaaacatgta ctacttctca gagcttgctc tgactctcaa tgcttgggaa 961 agtggcactg cccccacaga cagccggtta cgacctgacc agagactgat ggaaaatgga 1021 cgctgggatg aagcaaatgc ggagaagcag cgcctggagg aaaaacaaag actttccaga 1081 aagaagagag aagcggaagc tatgaaagcc acagaggatg gcacaccata tgatccctat 1141 aaggcactgt ggtttgagcg gaagaaggac cctgttacca aggagttaac ccatatttat 1201 aggggagaat actgggagtg taaagaaaaa caggactgga gctcatgccc ggacattttc 1261 tgaaacggca gtaacaaaaa agaggagcat ataatggaga agaggacaga ggatgtgtgg 1321 gaaagctgga agttgtgact ctcttaccaa gtgctttcct caagtttgtc tctcttgacc 1381 aatcattttt tccaaatcaa tcaccagaag gagacaccag tggtggtgat tggctggttg 1441 ccttagctga ttgaaactga aatcgacata ggagatacta tgtctgtaag ggagaggttt 1501 agtggccgaa ggttagtgtt attccacatc cacgaagtca agtattcttg gctcttcttt 1561 ctccctctgc ccccatttaa gacaatgtca ctcaccctcc ccttgtagta tcctgctcag 1621 ccaagatctg cctaagatta tgattcaggg gcattttggt gctgttaaaa gcaagagccg 1681 aatttagaag ttcccttaaa aagaaacaca taagacttac caatggaggc attgtgaatg 1741 gttgcagtgg agcttaggta taacatcatc aagtgtgttc acacgcgggg tcggtttaat 1801 ggagtgtcca cgcggagata actgcgatat tggaacacct gtgagagaga ttgttctata 1861 gggctggaat attcagagtt acattcttgg aagtttctgt ttttacttgc atcaaacacc 1921 cctctgttgt tctccatcat ctttaatagc aactggagac cactttggtc attggtaagg 1981 gggtgcattc tcctcacaaa ggggttttat ggacttcctc aggcggagag cttctgagaa 2041 cacaggcagg atggaaaaag actactagcc acttttgctt tcccaacccc ccttaatgcc 2101 atccttcatt gtctttctgg cttctcttct tctggcacag taccattttg ggtctgtgcc 2161 ccagtgtgga gcaaaacatt gcctgtccca ttctgatata cttcagaatt tgagagcaga 2221 agttaatgtg gaacaaaagt tttcaccatc tctcaagccc caaggactgg agccacctct 2281 ggaataatgt gttaaatatc tgtatattat atatatgtag agaaaaatct aattttttgg 2341 tttgatttcc ttcccattaa gaatcttgtt ttttgatacc cttgtctccc tgagactctt 2401 tcttggacac gtgttgatgt ggatggcact cctgctctcc atcttttatg ggcagagaga 2461 tttcaaaacc tgagcaggat catgtctggc agttactaaa cagggacttt gtccatggtt 2521 tgtatcatgg ggtgcctact gctgtctaaa ctctgctctc ctaattagct gactcttgaa 2581 aatgaaatcc taacctcttt cctgcctctt ttctttctct tttcaggaag agtgtgggta 2641 gaaagtccgg agggcaactt ccaatttaat tctgctctgt ccggcgcata ggctgaattc 2701 caaaagaact ttcttcctag gatgtggggc ttaaagcacc gtcatgtggg gtggatcaga 2761 taattgctcc tgtggggccc tggcttcctt ctctgtttgt gcagtatttg tttttgttgt 2821 cttgttgaga aatatcccct gtgcaaccca cccttggttg aggatcacaa attgaggtgc 2881 cttccttgta tgctttttgt tagtattttt tgtttttgtt ccttaactgc tgagcctcag 2941 ccagcgtggg tcctggggga aataccattc caaaggaagc catccctatg gggaaattgg 3001 ttttactggg taaattaata cttttatttc ttcccctatc ccttccttcc tagttgtgat 3061 aaacatggga gaggagtgac tttgactgct ggggaatttc ctcctaagaa ccttattccc 3121 aaaataagcc agggattatg tcaaggcttc tttcaaggag gctcataaaa gcagtgacct 3181 catccggggc tttggataga gtgagaattc cccaactaaa ttggacttct ctgctttatc 3241 cccttctctt ccttcaccat ctgcactaca tttctggctg atcccaatca gattcccgct 3301 aatggaagaa gtttagaatc tttcaggtgg aataaagtca catgaaaaca aaacacaact 3361 atatatattt tcagtttttt tgccttattg atttttttcc aaaaaaaaaa aactactaaa 3421 ttaaataatt ttttaaaagt ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //