LOCUS BC063115 2159 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens ring finger protein 20, mRNA (cDNA clone
IMAGE:30327678), partial cds.
ACCESSION BC063115
VERSION BC063115.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2159)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2159)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16554452.
FEATURES Location/Qualifiers
source 1..2159
/db_xref="H-InvDB:HIT000260762"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30327678"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>2159
/gene="RNF20"
/gene_synonym="BRE1A"
/gene_synonym="FLJ11189"
/gene_synonym="FLJ20382"
/gene_synonym="KIAA2779"
/db_xref="GeneID:56254"
/db_xref="MIM:607699"
CDS 74..>2159
/gene="RNF20"
/gene_synonym="BRE1A"
/gene_synonym="FLJ11189"
/gene_synonym="FLJ20382"
/gene_synonym="KIAA2779"
/codon_start=1
/product="RNF20 protein"
/protein_id="AAH63115.1"
/db_xref="GeneID:56254"
/db_xref="MIM:607699"
/translation="MSGIGNKRAAGEPGTSMPPEKKAAVEDSGTTVETIKLGGVSSTE
ELDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDE
NIRIILKRYDLEQGLGDLLTERKALVVPEPEPDSDSNQERKDDRERGEGQEPAFSFLA
TLASSSSEEMESQLQERVESSRRAVSQIVTVYDKLQEKVELLSRKLNSGDNLIVEEAV
QELNSFLAQENMRLQELTDLLQEKHRTMSQEFSKLQSKVETAESRVSVLESMIDDLQW
DIDKIRKREQRLNRHLAEVLERVNSKGYKVYGAGSSLYGGTITINARKFEEMNAELEE
NKELAQNRLCELEKLRQDFEEVTTQNEKLKVELRSAVEQVVKETPEYRCMQSQFSVLY
NESLQLKAHLDEARTLLHGTRGTHQHQVELIERDEVSLHKKLRTEVIQLEDTLAQVRK
EYEMLRIEFEQTLAANEQAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQSDL
NKTRLRSGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASKASQEDANEIKSKRDE
EERERERREKEREREREREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAE
IIKQLKIELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLK
DLEDKKKKKKKKK"
BASE COUNT 720 a 425 c 602 g 412 t
ORIGIN
1 ggggccgcgg gtcaggggtg agagctggaa tctctgcacg ggccttggaa aacgactgtc
61 ttcttctgcc aaaatgtcag gaattggaaa taaaagagca gctggagaac ctggcacctc
121 catgcctcct gagaagaagg cagctgttga agattcaggg accacagtgg aaacaattaa
181 gctaggaggt gtctcttcaa cggaggaact agacattaga acactgcaaa ccaaaaatcg
241 caagctggca gaaatgttgg atcagcggca ggccattgaa gatgaacttc gtgagcacat
301 tgaaaaactg gaacgacgac aggccactga tgatgcctca ctattgattg tcaaccgata
361 ctggagtcag tttgatgaaa acatccgtat catccttaaa cgttatgatc tggagcaggg
421 cttgggagac ctactcacag aacgaaaagc ccttgttgtg cctgaaccag aaccagactc
481 tgatagcaat caggagcgta aagatgaccg agagagaggg gaagggcaag agccagcttt
541 ctctttcctt gctactttgg ccagcagttc cagtgaagag atggagtctc agctgcagga
601 acgtgtggag tcttcccgcc gagccgtgtc ccagattgtg actgtttatg ataaattgca
661 agaaaaagtg gagctcttat cccggaagct aaacagtgga gataatctga tagtggagga
721 agcagtgcag gagctgaact ctttcctcgc acaggagaat atgaggctac aggaattgac
781 agatcttctt caggaaaagc atcgcaccat gtctcaggag ttctccaagt tgcagagtaa
841 agtggagaca gccgaatcac gagtgtctgt cctggagtcc atgattgatg acctgcagtg
901 ggatattgac aaaattcgaa agagggaaca gcgactcaac cgacacttag cagaagtcct
961 agaacgggtg aattccaaag gttataaggt gtatggagcg gggagcagtc tgtatggcgg
1021 cacaatcact atcaatgctc ggaagtttga ggaaatgaat gcagagcttg aggagaacaa
1081 agagttggct cagaaccgtc tctgtgagct ggagaaactt cggcaagact ttgaggaggt
1141 cactacacaa aatgaaaagc tgaaggtgga attgcggagt gcagtggagc aagtcgttaa
1201 ggaaactcca gaatatcgct gcatgcagtc acagttctcc gtcttgtata atgagagcct
1261 acagttgaaa gcacacttgg atgaggctcg gaccctgctt catggcacca gaggaaccca
1321 ccagcaccag gttgagctta ttgagcgaga tgaggttagt cttcataaga agctgaggac
1381 tgaagtaatt cagctagaag atacattggc ccaggtccgc aaggagtatg aaatgctgag
1441 gatagaattt gagcagaccc ttgctgccaa tgaacaagca ggccctataa acagggagat
1501 gcgccacctc atcagtagcc tccagaatca caatcaccag ctgaaagggg aggtcctgag
1561 atataagcgg aaattgagag aagcccagtc tgacctgaac aagacacgcc tgcgtagtgg
1621 tagtgccctc ctgcagtccc agtctagtac tgaggacccg aaggatgagc ctgcggagct
1681 aaaaccagat tctgaggact tatcctccca gtcctcagct tcaaaggcat ctcaggagga
1741 tgccaatgaa atcaagtcta aacgggatga agaagaacga gaacgagaaa ggagggagaa
1801 ggagagggaa cgagaaagag aacgggagaa ggagaaggag agagaacgag agaagcagaa
1861 gctaaaagag tcagaaaaag agagagattc tgctaaggat aaagagaaag gcaaacatga
1921 tgatggacgg aaaaaggaag cagaaattat caaacaattg aagattgaac tcaagaaggc
1981 acaggagagc caaaaggaga tgaaactatt gctggatatg taccgttctg ccccaaagga
2041 acagagagac aaagttcagc tgatggcagc tgagaagaag tctaaggcag agttggaaga
2101 tctaaggcaa agactcaagg atctggaaga taaaaaaaaa aaaaaaaaaa aaaaaaaaa
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