LOCUS BC063046 1879 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proline-rich transmembrane protein 1, mRNA (cDNA clone MGC:65172 IMAGE:5197474), complete cds. ACCESSION BC063046 VERSION BC063046.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1879) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1879) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: d Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361926. FEATURES Location/Qualifiers source 1..1879 /db_xref="H-InvDB:HIT000260753_11" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:65172 IMAGE:5197474" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1879 /gene="PRRT1" /gene_synonym="NG5" /db_xref="GeneID:80863" /db_xref="HGNC:HGNC:13943" CDS 65..985 /gene="PRRT1" /gene_synonym="NG5" /codon_start=1 /product="proline-rich transmembrane protein 1" /protein_id="AAH63046.1" /db_xref="GeneID:80863" /db_xref="HGNC:HGNC:13943" /translation="MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHH HHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCA TLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPL GGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRR PPHDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALARGDMVSAEIASREARNFSFISL AVGIAAMVLCTILTVVIIIAAQHHENYWDP" BASE COUNT 346 a 742 c 448 g 343 t ORIGIN 1 ctccagcacc ggccgaggac ccccactccg gctgcaggga ccctgtccca gcgagaccgc 61 aggcatgtca tccgaaaagt caggactccc agactcagtc cctcacactt ctccgccgcc 121 ctacaatgcc cctcagcctc cagccgaacc cccagcccca ccgccacagg cagccccttc 181 ctcacaccat caccaccacc accactacca tcagtctggc accgccaccc tcccgcgctt 241 aggggcaggg ggcctggcct cttccgcggc caccgctcag cgcggtccct cctcctctgc 301 cacgctgccg aggccccccc accacgcccc tcccggccct gctgccgggg cacccccacc 361 cggctgcgct accttgcccc gcatgccacc cgacccttac ctgcaggaga ctcgcttcga 421 gggcccactt cccccgccgc cgcccgctgc cgccgccccg cccccgccgg cgccagccca 481 gactgcccag gcccctggct tcgtggtgcc cacgcacgcg gggactgtgg gcacgctgcc 541 gctggggggc tacgtagcgc ccggataccc cctgcagctg cagccttgca ctgcttacgt 601 gccggtctac ccggtgggca cgccatatgc aggcgggacc ccggggggaa caggagtgac 661 ctccactctc cccccgccgc cccagggccc agggctggcc ctactggagc cgaggcgccc 721 gccacacgac tacatgccca tcgcggtgct gaccaccatc tgttgcttct ggcctactgg 781 catcattgcc atcttcaagg ccgtgcaggt gcgcacggcc ttggcccgcg gagacatggt 841 gtcggccgag atcgcttcac gcgaggcccg gaacttctcc ttcatctccc tggccgtggg 901 catcgcggcc atggtgctct gtaccatcct caccgtagtc atcatcatcg ccgcgcagca 961 ccacgagaac tactgggatc cctaaaaacg cccctggtcc ggccccactc tgcgcccctc 1021 gatctcccag gctctttctg cagtcatacc gcggacccaa tgggcgccct gcacacccgt 1081 ttctggggcc gtcagacttg gatacatcgt aaactccgcc tccacggaac gtctcgcctt 1141 gcgagcaagc tcggaatcca gttcctcagg aacccctcca aaacccacac ccccagggac 1201 gccgctttcc gggatcccgg ccaaacgccg gaccctcagt cgctccaggc cccctcaccc 1261 tcaaagtgta gcgcccccaa ccgagcaacc tcggtttggt ccctaaaacc ccgcctcctc 1321 tataagcacc gccccagctc tgacaaaacc ccgcctccag gtcggcaggc tccgccttct 1381 tttcttctcc gcggggtgat tcagtccagt gattgggttt gtggctccag gcctcgccca 1441 cagacggaca gacccctccc tttcttccgg caaaaggacc gagccctggg gtagtaaggc 1501 ccccacactc ctgttttttg caagtacatt tttgtccctc ctccacccag gtatctgcct 1561 attttcttgc taatcccaga acctttcctt ttgctttttt taaggacatt tgggaagttc 1621 ctggtgtagg acccttctcc ctgggataag aaacctgcct gtaaacgctc tgtaaatact 1681 cccttccacc catcccagcc cctgggcagc cgggcagaag ggaatccagg ctatggacct 1741 cccaagtccc cgctccccgc tcccctcggc ggccccgcct tgttctgatc tgtgtgtgag 1801 tgtgtgtgaa cttctgaaag acaatattaa agagacttag ttgaaaaaaa aaaaaaaaaa 1861 aaaaaaaaaa aaaaaaaaa //