LOCUS BC062982 1807 bp mRNA linear HUM 24-FEB-2004
DEFINITION Homo sapiens zinc finger protein 552, mRNA (cDNA clone
IMAGE:6574426), partial cds.
ACCESSION BC062982
VERSION BC062982.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1807)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1807)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13443019.
FEATURES Location/Qualifiers
source 1..1807
/db_xref="H-InvDB:HIT000260692"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6574426"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1807
/gene="ZNF552"
/gene_synonym="FLJ21603"
/db_xref="GeneID:79818"
CDS <1..832
/gene="ZNF552"
/gene_synonym="FLJ21603"
/codon_start=2
/product="ZNF552 protein"
/protein_id="AAH62982.1"
/db_xref="GeneID:79818"
/translation="GNFHQHQNEHIGEKPYRGSVEEALFAKRCKLHVSGESSVFSESG
KDFLLRSGLLQQEATHTGKSNSKTECVSLFHGGKSHYSCGGCMKHFSTKDILSQHERL
LPTEEPSVWCECGKSSSKYDSFSNHQGVHTREKPYTCGICGKLFNSKSHLLVHQRIHT
GEKPYECEVCQKFFRHKYHLIAHQRVHTGERPYECSDCGKSFTHSSTFRVHKRVHTGQ
KPYECSECGKSFAESSSLTKHRRVHTGEKPYGCSECEKKFRQISSLRHHQRVHKRKGL
"
BASE COUNT 530 a 372 c 407 g 498 t
ORIGIN
1 tggaaacttt catcagcacc agaatgagca cattggagag aaaccctaca gagggagtgt
61 tgaggaggcg ttgtttgcga agaggtgtaa gttgcatgtg tcaggggagt catctgtctt
121 cagtgagagt gggaaagact ttttgctcag gtcaggatta ctccagcaag aggccactca
181 cactgggaag tcaaacagca aaactgagtg tgtgtctctg tttcatgggg gaaaaagcca
241 ttacagctgt ggaggatgca tgaaacattt tagcaccaaa gatatactca gtcagcacga
301 gagactgctc cctacagaag aaccttctgt gtggtgtgaa tgtgggaaat cctctagcaa
361 atatgacagc ttcagtaatc atcaaggagt tcacactaga gaaaaacctt atacgtgtgg
421 gatatgtggg aaattattta acagtaagtc ccacctcctt gtacaccaga gaattcacac
481 tggagagaag ccatatgagt gtgaggtttg tcagaaattt tttaggcaca agtaccacct
541 cattgcacac cagagagttc acactggaga aaggccatat gaatgcagtg attgtgggaa
601 gtcatttacc cacagctcta cattccgtgt tcataagaga gttcacactg gtcagaagcc
661 ttatgagtgc agtgaatgtg ggaaatcttt tgccgaaagc tccagtctca ctaaacacag
721 gagagttcac actggagaaa agccttacgg gtgcagtgaa tgtgaaaaaa aatttaggca
781 aatctcttca cttcgtcatc atcagagagt tcacaaaaga aagggcttat gagtgcagtg
841 agtccagtct cattaaatat tggagaatac acacctgagt aagatcctgt gattgcagca
901 aatgtggaaa atgtttaccc aaaggtctgc tctccttgga tattggagag ttcacactag
961 agaagagtcc ttacaagtaa aataaatttg ggcagttttg tagccacacc tctgtattcc
1021 ttcaggatta tagttaacac tgaatgaagg ccttactagt gtgacaaata caggatattt
1081 atccagaagt ctggctgcat aactcacagg agagctgtca tgtgggagga ttgctacatg
1141 ggaggatttg cttgggcctg ggaggcagag gttgcagtga gccgagattg caacactgca
1201 gtccagtctg gaccacagag tgagaccctg tttcaaaaat aaaatatata aatgacatcc
1261 aataaagtat gcatatttga gctgtaggat aagtcttgaa ttttcttttt cttttttttg
1321 agacagcctc gctctgtcac ccaggctgga gtacagtggc ataatctcgg ctcactgcaa
1381 gccctgcctc ctgggttcat gccattctcc tgcctcagcc tccctaatag ctgggactac
1441 aggcaaccac caccactcct accttttttg tatttttagt agagatgggg tttcaccctg
1501 ttagccagga agttctcaat ctcctgacct cgtgatctgc ccgccttggc ctctcaaagt
1561 gttgggattg caggcgtgag ccactgctcc tggcttgaat tttcttataa tcccatgaaa
1621 ccatcatcag agtcacaata atgaatttat ctaatctatc acctttgtat tcacctggag
1681 cctttataaa gtttttctct atgcagacaa ccattgattt actctgctgt ataatacttt
1741 ccattttcta gaattttctg actgatgtaa taaagtgttt cctcttataa aaaaaaaaaa
1801 aaaaaaa
//