LOCUS BC062770 1412 bp mRNA linear HUM 24-NOV-2004
DEFINITION Homo sapiens cingulin-like 1, mRNA (cDNA clone IMAGE:4551636),
partial cds.
ACCESSION BC062770
VERSION BC062770.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1412)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1412)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: g Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1412
/db_xref="H-InvDB:HIT000260661"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4551636"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..>1412
/gene="CGNL1"
/gene_synonym="FLJ14957"
/gene_synonym="JACOP"
/gene_synonym="KIAA1749"
/db_xref="GeneID:84952"
/db_xref="MIM:607856"
CDS <1..>1412
/gene="CGNL1"
/gene_synonym="FLJ14957"
/gene_synonym="JACOP"
/gene_synonym="KIAA1749"
/codon_start=3
/product="CGNL1 protein"
/protein_id="AAH62770.1"
/db_xref="GeneID:84952"
/db_xref="MIM:607856"
/translation="AEEGINNKKPWTCFPKPSNSQPTSPSLEDPAKSGVTAIRLCSSV
VIEDPKKQTSVCVNVQSCTKERVGEEALFTSGRPLTAHSPHAHPETKKTRPDVLPFRR
QDSAGPVLDGARSRRSSSSSTTPTSANSLYRFLLDDQECAIHADNVNRHENRRYIPFL
PGTGRDIDTGSIPGVDQLIEKFDQKPGLQRRGRSGKRNRINPDDRKRSRSVDSAFPFG
LQGNSEYLIEFSRNLGKSSEHLLRPSQVCPQRPLSQERRGKQSVGRTFAKLQGAAHGA
SCAHSRPPQPNIDGKVLETEGSQESTVIRAPSLGAQSKKEEEVKTATATLMLQNRAAA
TSPDSGAKKISVKTFPSASNTQATPDLLKGQQELTQQTNEETAKQILYNYLKEGSTDN
DDATKRKVNLVFEKIQTLKSRAAGSAQGNNQACNSTSEVKDLLEQKSKLTIEVAELQR
QLQLEVKNQQKKKKKKKKKK"
BASE COUNT 432 a 358 c 351 g 271 t
ORIGIN
1 gggcagaaga aggcatcaac aataagaagc cttggacttg ctttcccaaa cctagcaatt
61 cccagcctac cagtccctcc ttggaagacc cggccaaatc tggtgtgaca gctattcgtt
121 tatgcagctc cgtggtcata gaggacccca aaaagcagac ctcagtgtgt gtaaacgttc
181 agagctgcac caaggagagg gtgggagagg aggccctttt cactagcggg aggcccctga
241 ctgcccacag cccacatgcc caccctgaaa ccaagaaaac caggccagat gttcttccct
301 tccggcgaca ggattcagcg ggacccgtcc tggatggagc tcggtcccgg aggtcctcct
361 cgtcatccac aactcccacg tcagccaact ctttgtacag gtttttactg gatgatcagg
421 aatgtgccat ccatgccgac aacgtcaatc gtcatgaaaa cagaaggtat attcccttcc
481 tgccaggaac tggacgggat attgatacag gatcaattcc tggtgtggat cagttaattg
541 aaaaatttga tcaaaaacct gggcttcaga gaagaggaag gtctgggaag cgaaacagaa
601 ttaatccaga tgacaggaaa agatccagaa gcgtggatag cgcctttcct tttggcctcc
661 aagggaactc ggagtacctg attgaattca gtaggaactt gggcaagtca agcgaacacc
721 tcctccggcc ttcccaggtg tgcccgcagc ggccactgtc tcaggagcgc cgtgggaaac
781 agagcgtggg ccgcaccttt gcaaagctgc agggagcagc gcacggggct tcatgtgccc
841 actccaggcc tccccagccg aacatagatg ggaaagttct ggaaaccgaa ggtagtcagg
901 aaagtacagt gatccgtgcg ccctcccttg gtgcacagag taaaaaggag gaggaggtga
961 aaacagccac cgctacgctg atgttacaga accgggcagc agcaacttcg cctgattctg
1021 gtgccaagaa aatttccgtg aagacatttc cttcggcctc aaatactcag gccacaccgg
1081 atctcttaaa gggccagcaa gagctcactc agcaaaccaa tgaggagaca gctaagcaga
1141 ttctctacaa ttacctcaaa gaaggaagca ctgataatga cgatgctact aaaaggaaag
1201 tcaacttggt ctttgagaaa atccagacct taaagtctcg agcagctggg agcgcccaag
1261 gaaataacca agcttgtaat tccacatctg aagtcaaaga tctattggaa cagaaaagca
1321 agttgaccat agaagtggct gaacttcaga gacagcttca actggaagtc aagaatcaac
1381 agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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