LOCUS BC062719 1057 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens chromosome 18 open reading frame 34, mRNA (cDNA clone
IMAGE:6617036), partial cds.
ACCESSION BC062719
VERSION BC062719.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1057)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1057)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: n Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1057
/db_xref="H-InvDB:HIT000260610"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6617036"
/tissue_type="Testis"
/clone_lib="NIH_MGC_82"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1057
/gene="C18orf34"
/db_xref="GeneID:374864"
CDS 166..>1057
/gene="C18orf34"
/codon_start=1
/product="C18orf34 protein"
/protein_id="AAH62719.1"
/db_xref="GeneID:374864"
/translation="MTENKTVSSSSTRDDQTNIGLTCQEVKALREKAWSRTNEGNAMS
QSLVLYGASKENSEGFHESKMTNTEGVNKGIYFSYPCRRHSCAVVNIPAPCVNKMISH
IQDVESKIQEHLKRFETSFEEWSRTSSTKDLKEDWSVTTPVKEVKPGEKRDEKCPELK
QEMETLLSEAIRLIKSLETDRADAEEALKQQRSRKNMINMKIDSWSVWKLQELPLAVQ
KEHEAYLSDVIELQWHLEDKANQLQHFEKQKTELEEANAKIQADIDYMNEHGPLLDSK
QNQELQDLKNHYKKKKKKKKK"
BASE COUNT 405 a 193 c 222 g 237 t
ORIGIN
1 ggggggggaa acgcgcggag ccgtgtctgc tcaatcaagt caaatactga acaacttcct
61 ggcggagagg ctgagaattt tatacttgct tgctcgaaag caccccaaat aagatgatcc
121 acgccaacac ctccccttta caggttttaa aatattctta taactatgac tgaaaacaag
181 acagtttcct cttcttccac tagagatgat caaaccaata taggtttaac atgtcaggaa
241 gtaaaggctc tcagagagaa ggcatggtca aggacaaatg aaggcaatgc catgtctcaa
301 agtttggttc tatatggagc ctctaaggag aacagtgaag gttttcatga aagtaaaatg
361 acaaatactg aaggggtgaa taaaggcatt tactttagct acccatgtcg acgtcacagc
421 tgtgccgtag taaatattcc agcaccttgt gtcaacaaaa tgatttcaca catccaagat
481 gtggagtcca aaatacagga gcatttgaaa aggtttgaaa cttcttttga agaatggagc
541 agaacttctt ccacaaaaga cctgaaagaa gattggagtg taactacacc agtgaaagag
601 gtcaaaccag gagaaaagag agatgaaaag tgtccagagt taaagcagga aatggaaaca
661 ttgctctcag aggccattcg tctcattaaa agtctagaaa ctgaccgggc agacgctgaa
721 gaagctttaa aacaacagag atcaagaaag aatatgatta acatgaaaat tgactcttgg
781 tcagtctgga aacttcaaga actcccattg gctgtgcaga aagaacatga ggcctatttg
841 agtgatgtta tagaattaca atggcatctt gaagataaag ctaatcaact acaacatttt
901 gaaaaacaaa agacagagtt agaagaagca aatgcaaaga ttcaagcaga catagactac
961 atgaatgaac atggccctct actggactct aagcagaatc aggaacttca agatctgaag
1021 aaccattaca aaaaaaaaaa aaaaaaaaaa aaaaaaa
//