LOCUS BC062693 506 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens secretoglobin, family 1D, member 1, mRNA (cDNA clone
MGC:71958 IMAGE:30327780), complete cds.
ACCESSION BC062693
VERSION BC062693.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 506)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 506)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: a Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5729906.
FEATURES Location/Qualifiers
source 1..506
/db_xref="H-InvDB:HIT000260584"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71958 IMAGE:30327780"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..506
/gene="SCGB1D1"
/gene_synonym="LIPA"
/gene_synonym="LPHA"
/db_xref="GeneID:10648"
/db_xref="HGNC:HGNC:18395"
CDS 78..350
/gene="SCGB1D1"
/gene_synonym="LIPA"
/gene_synonym="LPHA"
/codon_start=1
/product="secretoglobin, family 1D, member 1"
/protein_id="AAH62693.1"
/db_xref="GeneID:10648"
/db_xref="HGNC:HGNC:18395"
/translation="MRLSVCLLLLTLALCCYRANAVVCQALGSEITGFLLAGKPVFKF
QLAKFKAPLEAVAAKMEVKKCVDTMAYEKRVLITKTLGKIAEKCDR"
BASE COUNT 174 a 103 c 109 g 120 t
ORIGIN
1 gggccaggag gctcccgggg ctgagtctaa atcactcatc attggttaaa gccgagctca
61 cagcagaata agccaccatg aggctgtcgg tgtgtctcct gctgctcacg ctggcccttt
121 gctgctaccg ggcaaatgca gtggtctgcc aagctcttgg ttctgaaatc acaggcttct
181 tattagctgg aaaacctgtg ttcaagttcc aacttgccaa atttaaggca cctctggaag
241 ctgttgcagc caagatggaa gtgaagaaat gcgtggatac gatggcctat gagaaaagag
301 tgctaattac aaaaacattg ggaaaaatag cagagaaatg tgatcgctga gatgtaaaaa
361 gtttttaatg ctagtttcca ccatctttca atgataccct gatcttcact gcagaatgta
421 aaggtttcaa cgtcttgctc taataaatca cttgccctga aaaaaaaaaa aaaaacaaaa
481 aaaaaaaaaa aaaaaaaaaa aaaaaa
//