LOCUS BC062687 1101 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens ADAM metallopeptidase domain 17, mRNA (cDNA clone IMAGE:6104599), complete cds. ACCESSION BC062687 VERSION BC062687.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1101) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1101) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 51 Row: l Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11497003 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1101 /db_xref="H-InvDB:HIT000260578" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6104599" /tissue_type="Testis" /clone_lib="NIH_MGC_82" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1101 /gene="ADAM17" /gene_synonym="CD156b" /gene_synonym="cSVP" /db_xref="GeneID:6868" /db_xref="HGNC:HGNC:195" /db_xref="MIM:603639" CDS 170..799 /gene="ADAM17" /gene_synonym="CD156b" /gene_synonym="cSVP" /codon_start=1 /product="ADAM17 protein" /protein_id="AAH62687.1" /db_xref="GeneID:6868" /db_xref="HGNC:HGNC:195" /db_xref="MIM:603639" /translation="MRQSLLFLTSVVPFVLAPRPPDDPGFGPHQRLEKLDSLLSDYDI LSLSNIQQHSVRKRDLQTSTHVETLLTFSALKRHFKLYLTSSTERFSQNFKVVVVDGK NESEYTVKWQDFFTGHVVGEPDSRVLAHIRDDDVIIRINTDGAEYNIEPLWRFVNDTK DKRMLVYKSEDIKNVSRLQSPKVCGYLKVDNEELLPKGLVDREPPEGKT" BASE COUNT 363 a 194 c 266 g 278 t ORIGIN 1 gggggtcgag cctggcggta gaatcttccc agtaggcggc gcgggaggga aaagaggatt 61 gaggggctag gccgggcgga tcccgtcctc ccccgatgtg agcagttttc cgaaaccccg 121 tcaggcgaag gctgcccaga gaggtggagt cggtagcggg gccgggaaca tgaggcagtc 181 tctcctattc ctgaccagcg tggttccttt cgtgctggcg ccgcgacctc cggatgaccc 241 gggcttcggc ccccaccaga gactcgagaa gcttgattct ttgctctcag actacgatat 301 tctctcttta tctaatatcc agcagcattc ggtaagaaaa agagatctac agacttcaac 361 acatgtagaa acactactaa ctttttcagc tttgaaaagg cattttaaat tatacctgac 421 atcaagtact gaacgttttt cacaaaattt caaggtcgtg gtggtggatg gtaaaaacga 481 aagcgagtac actgtaaaat ggcaggactt cttcactgga cacgtggttg gtgagcctga 541 ctctagggtt ctagcccaca taagagatga tgatgttata atcagaatca acacagatgg 601 ggccgaatat aacatagagc cactttggag atttgttaat gataccaaag acaaaagaat 661 gttagtttat aaatctgaag atatcaagaa tgtttcacgt ttgcagtctc caaaagtgtg 721 tggttattta aaagtggata atgaagagtt gctcccaaaa gggttagtag acagagaacc 781 acctgaaggt aagacttaaa gagtgtattt caaataagaa acaaacatac tacaattgac 841 ttcagtaggg gtggttgtta tttgttaaaa agtaacatga ttgtcaagta actatagtat 901 ttggcatgaa aataagaggt ttgttccaga aattttcatc ttcttttgtt tataatgtaa 961 gagttgaaaa ctctggaaaa taatgggaac aacagagatt agactttaaa aaagattagg 1021 gaaaagggaa atggagtgat ctgagggaaa atattcctgc agatatttag aaaaaaaaaa 1081 aaaaaaaaaa aaaaaaaaaa a //