LOCUS BC062682 544 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens dermcidin, mRNA (cDNA clone MGC:71930 IMAGE:30369929), complete cds. ACCESSION BC062682 VERSION BC062682.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 544) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 544) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 51 Row: b Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 16751920. FEATURES Location/Qualifiers source 1..544 /db_xref="H-InvDB:HIT000260573" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71930 IMAGE:30369929" /tissue_type="Skin and meninges pool- skin, dura matter, pia matter, choroid plexus." /clone_lib="NIH_MGC_186" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..544 /gene="DCD" /gene_synonym="AIDD" /gene_synonym="DCD-1" /gene_synonym="DSEP" /gene_synonym="HCAP" /gene_synonym="PIF" /db_xref="GeneID:117159" /db_xref="HGNC:HGNC:14669" /db_xref="MIM:606634" CDS 63..395 /gene="DCD" /gene_synonym="AIDD" /gene_synonym="DCD-1" /gene_synonym="DSEP" /gene_synonym="HCAP" /gene_synonym="PIF" /codon_start=1 /product="dermcidin" /protein_id="AAH62682.1" /db_xref="GeneID:117159" /db_xref="HGNC:HGNC:14669" /db_xref="MIM:606634" /translation="MRFMTLLFLTALAGALVCAYDPEAASAPGSGNPCHEASAAQKEN AGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGAVHDV KDVLDSVL" BASE COUNT 204 a 122 c 130 g 88 t ORIGIN 1 gggaccctag atcccaagat ctccaaggat tcggtggcat acccactcca gcacacagaa 61 gcatgaggtt catgactctc ctcttcctga cagctctggc aggagccctg gtctgtgcct 121 atgatccaga ggccgcctct gccccaggat cggggaaccc ttgccatgaa gcatcagcag 181 ctcaaaagga aaatgcaggt gaagacccag ggttagccag acaggcacca aagccaagga 241 agcagagatc cagccttctg gaaaaaggcc tagacggagc aaaaaaagct gtggggggac 301 tcggaaaact aggaaaagat gcagtcgaag atctagaaag cgtgggtaaa ggagccgtcc 361 atgacgttaa agacgtcctt gactcagtac tatagctgta aggagaagct gagaaatgat 421 acccaggagc agcaggcttt acgtcttcag cctaaaacct aaaaaaaaaa aaaaaaaaaa 481 aatttaaaac agctattaaa ctgaaagcat ctggaaaaaa aaaaaaaaaa aaaaaaaaaa 541 aaaa //