LOCUS BC062678 787 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cystatin D, mRNA (cDNA clone MGC:71922
IMAGE:30349574), complete cds.
ACCESSION BC062678
VERSION BC062678.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 787)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 787)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: b Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62241009.
FEATURES Location/Qualifiers
source 1..787
/db_xref="H-InvDB:HIT000260569"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71922 IMAGE:30349574"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..787
/gene="CST5"
/db_xref="GeneID:1473"
/db_xref="HGNC:HGNC:2477"
/db_xref="MIM:123858"
CDS 65..493
/gene="CST5"
/codon_start=1
/product="cystatin D"
/protein_id="AAH62678.1"
/db_xref="GeneID:1473"
/db_xref="HGNC:HGNC:2477"
/db_xref="MIM:123858"
/translation="MMWPMHTPLLLLTALMVAVAGSASAQSRTLAGGIHATDLNDKSV
QCALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNL
DNCPFNDQPKLKEEEFCSFQINEVPWEDKISILNYKCRKV"
BASE COUNT 202 a 226 c 190 g 169 t
ORIGIN
1 ggggagcctt ctgctgcttt gctctctggg agatccagct ccttgctctg tgtcccagta
61 gaacatgatg tggcccatgc acaccccact gctgctgctg actgccttga tggtggccgt
121 ggccgggagt gcctcggccc aatctaggac cttggcaggt ggcatccatg ccacagacct
181 caatgacaag agtgtgcagt gtgccctgga ctttgccatc agcgagtaca acaaggtcat
241 taataaggat gagtactaca gccgccctct gcaggtgatg gctgcctacc agcagatcgt
301 gggtggggtg aactactact tcaatgtgaa gttcggtcga accacatgca ccaagtccca
361 gcccaacttg gacaactgtc ccttcaatga ccagccaaaa ctgaaagagg aagagttctg
421 ctctttccag atcaatgaag ttccctggga ggataaaatt tccattctga actacaagtg
481 ccggaaagtc taggggtctg tgcaaggcct gtcacactga ccacctccta ctcccacccc
541 ctgtagtgct cccacccctg gactggtggc ccccaccctg ggggaggtct cctcatgcgc
601 ctgcaccagg agacagacac agaaggtggc aggaggcctt tgttgctcag caggaggctc
661 tgcccttgct ccttccttct tgcttctcat agccccagtg tgcagtgcac actctcccac
721 ctcctgcaat taaacagtag cattgcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
781 aaaaaaa
//