LOCUS BC062668 1134 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-C motif) ligand 28, mRNA (cDNA clone
MGC:71902 IMAGE:30326117), complete cds.
ACCESSION BC062668
VERSION BC062668.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1134)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1134)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538809.
FEATURES Location/Qualifiers
source 1..1134
/db_xref="H-InvDB:HIT000260559"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71902 IMAGE:30326117"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1134
/gene="CCL28"
/gene_synonym="CCK1"
/gene_synonym="MEC"
/gene_synonym="SCYA28"
/db_xref="GeneID:56477"
/db_xref="HGNC:HGNC:17700"
/db_xref="MIM:605240"
CDS 18..401
/gene="CCL28"
/gene_synonym="CCK1"
/gene_synonym="MEC"
/gene_synonym="SCYA28"
/codon_start=1
/product="chemokine (C-C motif) ligand 28"
/protein_id="AAH62668.1"
/db_xref="GeneID:56477"
/db_xref="HGNC:HGNC:17700"
/db_xref="MIM:605240"
/translation="MQQRGLAIVALAVCAALHASEAILPIASSCCTEVSHHISRRLLE
RVNMCRIQRADGDCDLAAVILHVKRRRICVSPHNHTVKQWMKVQAAKKNGKGNVCHRK
KHHGKRNSNRAHQGKHETYGHKTPY"
BASE COUNT 378 a 213 c 250 g 293 t
ORIGIN
1 ggggagggca ggcaggaatg cagcagagag gactcgccat cgtggccttg gctgtctgtg
61 cggccctaca tgcctcagaa gccatacttc ccattgcctc cagctgttgc acggaggttt
121 cacatcatat ttccagaagg ctcctggaaa gagtgaatat gtgtcgcatc cagagagctg
181 atggggattg tgacttggct gctgtcatcc ttcatgtcaa gcgcagaaga atctgtgtca
241 gcccgcacaa ccatactgtt aagcagtgga tgaaagtgca agctgccaag aaaaatggta
301 aaggaaatgt ttgccacagg aagaaacacc atggcaagag gaacagtaac agggcacatc
361 aggggaaaca cgaaacatac ggccataaaa ctccttatta gagagtctac agataaatct
421 acagagacaa ttcctcaagt ggacttggcc atgattggtt gtaagtttat catctgaatt
481 ctccttattg tagacaacag aacaaaacaa aatattggtt tttaaaaaat gaacaattgt
541 gcggtatgca aatgtagcca ataatatact caactggaaa atgaaatgaa aagataatac
601 tggctgggta tggtggttca caccttttat cccagcactt cgggaggctg aggcaggagg
661 atcacttgag accaggagtt tgagaccagc ctgggcaaca tagcaagacc tcatttctac
721 aaacaaaaaa aaaattggcc cggcatggtg gtacttgcct gtagtcccag ccacatggga
781 ggctgaggtg ggaggatcac ttgagtctgg gagagtttga ggttgcagtg agcagcctgg
841 gtgacagaat gagaccctgt ctctaaaaat aataataata atgatagtgt atatcttcat
901 ataatatttt aagaggagca tatagatata acttctccca actttttaat tatagttttc
961 caaacttaca gagaagttaa aagaatggta caatgaacat ctatatatct ttcaccacaa
1021 tattaatcat tgttaatatt gtgtcacatt tgctttctct ctcctctctt tgtatgtgtt
1081 tctatataaa atattataac ttttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//