LOCUS BC062618 2536 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase,
polypeptide 4, mRNA (cDNA clone MGC:74863 IMAGE:5189057), complete
cds.
ACCESSION BC062618
VERSION BC062618.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2536)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2536)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13929469.
FEATURES Location/Qualifiers
source 1..2536
/db_xref="H-InvDB:HIT000260528"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74863 IMAGE:5189057"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2536
/gene="B4GALT4"
/gene_synonym="B4Gal-T4"
/gene_synonym="beta4Gal-T4"
/db_xref="GeneID:8702"
/db_xref="MIM:604015"
CDS 642..1676
/gene="B4GALT4"
/gene_synonym="B4Gal-T4"
/gene_synonym="beta4Gal-T4"
/codon_start=1
/product="B4GALT4 protein"
/protein_id="AAH62618.1"
/db_xref="GeneID:8702"
/db_xref="MIM:604015"
/translation="MGFNLTFHLSYKFRLLLLLTLCLTVVGWATSNYFVGAIQEIPKA
KEFMANFHKTLILGKGKTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEVQ
AENPKVSRGRYRPEECKALQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVI
HQAEGKKFNRAKLLNVGYLEALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVG
RNSTGYRLRYSGYFGGVTALSREQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISR
PLPEVGKYTMVFHTRDKGNEVNAERMKLLHQVSRVWRTDGLSSCSYKLVSVEHNPLYI
NITVDFWFGA"
BASE COUNT 756 a 520 c 626 g 634 t
ORIGIN
1 ccggctcagg tgctggcgtt ccgcgcggcg ccgcctctgc tgcgggccgg gggagccaga
61 cgaggtgctg ccgggtagga aaaaatccag ggctcattca taccccaggt cacgattccg
121 gggtcgcccc cagcacttct ccgccgggtg catcaacctg aaaaagcccc ttcttcctgg
181 aaaccctcct tctccagcgt ttcaacgggg aaactgatca gctgacacca gccccagtcc
241 tgcgaggggc cggcgacctt tgacctttct ccaaagggga ccacctggct tcatgtgtgg
301 atttccatgg ctcttgccca gaggcgggta cactgtgttc caatgtgcca cggaactcac
361 gcagtggcac tttgtggctt catgaaggaa gaggcaggcc acgcaacact tcctccccaa
421 gccaaggaga agtatcactt ttagaggcag aggagcggaa ggcagtgggt gtgaccaaaa
481 gtgccatttg ttaaagactg ttggagcaga actactgaga aaaaccaggc attgtatctt
541 cagttgtcat caagttcgca atcagattgg aaaagctcaa cttgaagctt tcttgcctgc
601 agtgaagcag agagatagat attattcacg taataaaaaa catgggcttc aacctgactt
661 tccacctttc ctacaaattc cgattactgt tgctgttgac tttgtgcctg acagtggttg
721 ggtgggccac cagtaactac ttcgtgggtg ccattcaaga gattcctaaa gcaaaggagt
781 tcatggctaa tttccataag accctcattt tggggaaggg aaaaactctg actaatgaag
841 catccacgaa gaaggtagaa cttgacaact gcccttctgt gtctccttac ctcagaggcc
901 agagcaagct cattttcaaa ccagatctca ctttggaaga ggtacaggca gaaaatccca
961 aagtgtccag aggccggtat cgccctgagg aatgtaaagc tttacagagg gtcgccatcc
1021 tcgttcccca ccggaacaga gagaaacacc tgatgtacct gctggaacat ctgcatccct
1081 tcctgcagag gcagcagctg gattatggca tctacgtcat ccaccaggct gaaggtaaaa
1141 agtttaatcg agccaaactc ttgaatgtgg gctatctaga agccctcaag gaagaaaatt
1201 gggactgctt tatattccac gatgtggacc tggtacccga gaatgacttt aacctttaca
1261 agtgtgagga gcatcccaag catctggtgg ttggcaggaa cagcactggg tacaggttac
1321 gttacagtgg atattttggg ggtgttactg ccctaagcag agagcagttt ttcaaggtga
1381 atggattctc taacaactac tggggatggg gaggcgaaga cgatgacctc agactcaggg
1441 ttgagctcca aagaatgaaa atttcccggc ccctgcctga agtgggtaaa tatacaatgg
1501 tcttccacac tagagacaaa ggcaatgagg tgaacgcaga acggatgaag ctcttacacc
1561 aagtgtcacg agtctggaga acagatgggt tgagtagttg ttcttataaa ttagtatctg
1621 tggaacacaa tcctttatat atcaacatca cagtggattt ctggtttggt gcatgaccct
1681 ggatcttttg gtgatgtttg gaagaactga ttctttgttt gcaataattt tggcctagag
1741 acttcaaata gtagcacaca ttaagaacct gttacagctc attgttgagc tgaatttttc
1801 ctttttgtat tttcttagca gagctcctgg tgatgtagag tataaaacag ttgtaacaag
1861 acagctttct tagtcatttt gatcatgagg gttaaatatt gtaatatgga tacttgaagg
1921 actttatata aaaggatgac tcaaaggata aaatgaacgc tatttgagga ctctggttga
1981 aggagattta tttaaatttg aagtaatata ttatgggata aaaggccaca ggaaataaga
2041 ctgctgaatg tctgagagaa ccagagttgt tctcgtccaa ggtagaaagg tacgaagata
2101 caatactgtt attcatttat cctgtacaat catctgtgaa gtggtggtgt caggtgagaa
2161 ggcgtccaca aaagagggga gaaaaggcga cgaatcagga cacagtgaac ttgggaatga
2221 agaggtagca ggagggtgga gtgtcggctg caaaggcagc agtagctgag ctggttgcag
2281 ctgctgatag ccttcagggg aggacctgcc caggtatgcc ttccagtgat gcccaccaga
2341 gaatacattc tctattagtt tttaaagagt ttttgtaaaa tgattttgta caagtaggat
2401 atgaattagc agtttacaag tttacatatt aactaataat aaatatgtct atcaaatacc
2461 tctgtagtaa aatgtgaaaa agcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaa
//