LOCUS BC062595 1630 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens histocompatibility (minor) 13, mRNA (cDNA clone
MGC:74542 IMAGE:5245982), complete cds.
ACCESSION BC062595
VERSION BC062595.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 135 Row: m Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30581112.
FEATURES Location/Qualifiers
source 1..1630
/db_xref="H-InvDB:HIT000260505"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74542 IMAGE:5245982"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1630
/gene="HM13"
/gene_synonym="dJ324O17.1"
/gene_synonym="H13"
/gene_synonym="IMP1"
/gene_synonym="IMPAS"
/gene_synonym="MSTP086"
/gene_synonym="PSENL3"
/gene_synonym="PSL3"
/gene_synonym="SPP"
/db_xref="GeneID:81502"
/db_xref="HGNC:HGNC:16435"
/db_xref="MIM:607106"
CDS 94..1227
/gene="HM13"
/gene_synonym="dJ324O17.1"
/gene_synonym="H13"
/gene_synonym="IMP1"
/gene_synonym="IMPAS"
/gene_synonym="MSTP086"
/gene_synonym="PSENL3"
/gene_synonym="PSL3"
/gene_synonym="SPP"
/codon_start=1
/product="histocompatibility (minor) 13"
/protein_id="AAH62595.1"
/db_xref="GeneID:81502"
/db_xref="HGNC:HGNC:16435"
/db_xref="MIM:607106"
/translation="MDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMAL
LPIFFGALRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYIN
LLLSMYFFVLGILALSHTISPFMNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDT
KDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIY
DVFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALL
LRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVA
LAKGEVTEMFSYEESNPKDPAAVTESKEGTEASASKGLEKKEK"
BASE COUNT 405 a 481 c 401 g 343 t
ORIGIN
1 gggaacgtgg ctttccctgc agagccggtg tctccgcctg cgtccctgct gcagcaaccg
61 gagctggagt cggatcccga acgcaccctc gccatggact cggccctcag cgatccgcat
121 aacggcagtg ccgaggcagg cggccccacc aacagcacta cgcggccgcc ttccacgccc
181 gagggcatcg cgctggccta cggcagcctc ctgctcatgg cgctgctgcc catcttcttc
241 ggcgccctgc gctccgtacg ctgcgcccgc ggcaagaatg cttcagacat gcctgaaaca
301 atcaccagcc gggatgccgc ccgcttcccc atcatcgcca gctgcacact cttggggctc
361 tacctctttt tcaaaatatt ctcccaggag tacatcaacc tcctgctgtc catgtatttc
421 ttcgtgctgg gaatcctggc cctgtcccac accatcagcc ccttcatgaa taagtttttt
481 ccagccagct ttccaaatcg acagtaccag ctgctcttca cacagggttc tggggaaaac
541 aaggaagaga tcatcaatta tgaatttgac accaaggacc tggtgtgcct gggcctgagc
601 agcatcgttg gcgtctggta cctgctgagg aagcactgga ttgccaacaa cctttttggc
661 ctggccttct cccttaatgg agtagagctc ctgcacctca acaatgtcag cactggctgc
721 atcctgctgg gcggactctt catctacgat gtcttctggg tatttggcac caatgtgatg
781 gtgacagtgg ccaagtcctt cgaggcacca ataaaattgg tgtttcccca ggatctgctg
841 gagaaaggcc tcgaagcaaa caactttgcc atgctgggac ttggagatgt cgtcattcca
901 gggatcttca ttgccttgct gctgcgcttt gacatcagct tgaagaagaa tacccacacc
961 tacttctaca ccagctttgc agcctacatc ttcggcctgg gccttaccat cttcatcatg
1021 cacatcttca agcatgctca gcctgccctc ctatacctgg tccccgcctg catcggtttt
1081 cctgtcctgg tggcgctggc caagggagaa gtgacagaga tgttcagtta tgaggagtca
1141 aatcctaagg atccagcggc agtgacagaa tccaaagagg gaacagaggc atcagcatcg
1201 aaggggctgg agaagaaaga gaaatgatgc agctggtgcc cgagcctctc agggccagac
1261 cagacagatg ggggctgggc ccacacaggc gtgcaccggt agagggcaca ggaggccaag
1321 ggcagctcca ggacagggca gggggcagca ggatacctcc agccaggcct ctgtggcctc
1381 tgtttccttc tccctttctt ggccctcctc tgctcctccc cacaccctgc aggcaaaaga
1441 aacccccagc ttcccccctc cccgggagcc aggtgggaaa agtgggtgtg atttttagat
1501 tttgtattgt ggactgattt tgcctcacat taaaaactca tcccatggcc aggaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa
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