LOCUS BC062557 2692 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens dermatan sulfate epimerase-like, mRNA (cDNA clone
IMAGE:6730132), partial cds.
ACCESSION BC062557
VERSION BC062557.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2692)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2692)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: p Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59938787.
FEATURES Location/Qualifiers
source 1..2692
/db_xref="H-InvDB:HIT000260469"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6730132"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2692
/gene="DSEL"
/db_xref="GeneID:92126"
/db_xref="HGNC:HGNC:18144"
CDS 339..>2692
/gene="DSEL"
/codon_start=1
/product="DSEL protein"
/protein_id="AAH62557.1"
/db_xref="GeneID:92126"
/db_xref="HGNC:HGNC:18144"
/translation="MALMFTGHLLFLALLMFAFSTFEESVSNYSEWAVFTDDIDQFKT
QKVQDFRPNQKLKKSMLHPSLYFDAGEIQAMRQKSRASHLHLFRAIRSAVTVMLSNPT
YYLPPPKHADFAAKWNEIYGNNLPPLALYCLLCPEDKVAFEFVLEYMDRMVGYKDWLV
ENAPGDEVPIGHSLTGFATAFDFLYNLLDNHRRQKYLEKIWVITEEMYEYSKVRSWGK
QLLHNHQATNMIALLTGALVTGVDKGSKANIWKQAVVDVMEKTMFLLNHIVDGSLDEG
VAYGSYTAKSVTQYVFLAQRHFNINNLDNNWLKMHFWFYYATLLPGFQRTVGIADSNY
NWFYGPESQLVFLDKFILKNGAGNWLAQQIRKHRPKDGPMVPSTAQRWSTLHTEYIWY
DPQLTPQPPADYGTAKIHTFPNWGVVTYGAGLPNTQTNTFVSFKSGKLGGRAVYDIVH
FQPYSWIDGWRSFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKLSHLNNVLVFAPSPS
SQCNKPWEGQLGECAQWLKWTGEEVGDAAGEIITASQHGEMVFVSGEAVSAYSSAMRL
KSVYRALLLLNSQTLLVVDHIERQEDSPINSVSAFFHNLDIDFKYIPYKFMNRYNGAM
MDVWDAHYKMFWFDHHGNSPMASIQEAEQAAEFKKRWTQFVNVTFQMEPTITRIAYVF
YGPYINVSSCRFIDSSNPGLQISLNVNNTEHVVSIVTDYHNLKTRFNYLGFGGFASVA
DQGQITRFGLGTQAIVKPVRHDRIIFPFGFKFNIAVGLKKKKKK"
BASE COUNT 805 a 501 c 567 g 819 t
ORIGIN
1 atagatttaa gtaaaggagg taaatgctaa attcatagtg ttttttacct gtatcacttc
61 cctgtgtatt atggaaaaat tagagatttt aacgttattc aaagttttac tggaagcaaa
121 actgtgccag ggacagagat atacaattta agttttctct ttttggcaac tgcacttgct
181 taaaatgtac tgaatgtcag ctggatttca cagcatatca gatttacagt ctttgtctta
241 tcaaggcctt tactgtatgt tttatactaa ccagatggga aacacattga gcatcatatc
301 tgacatgtat gcctaaggga ggagctcccc catggatcat ggcgttaatg tttacaggac
361 atttactatt cttagcatta ttgatgtttg ctttctctac ttttgaggaa tctgtgagca
421 attattccga atgggcagtt ttcacagatg atatagatca gtttaaaaca cagaaagtgc
481 aagatttcag acccaaccaa aagctgaaga aaagtatgct tcatccaagt ttatattttg
541 atgctggaga aatccaagca atgagacaaa agtctcgtgc aagccatttg catcttttta
601 gagctatcag aagtgcagtg acagttatgc tgtccaaccc aacatactac ctacctccac
661 caaagcatgc tgattttgct gccaagtgga atgaaattta tggtaacaat ctgcctcctt
721 tagcattgta ctgtttgtta tgcccagaag acaaagttgc ctttgaattt gtcttggaat
781 atatggacag gatggttggc tacaaagact ggctagtaga gaatgcacca ggagatgagg
841 ttccaattgg ccattcctta acaggttttg ccactgcctt tgacttttta tataacttat
901 tagataatca tcgacgacaa aaatacctgg aaaaaatatg ggttattact gaggaaatgt
961 acgagtattc caaggtccgc tcatggggca aacagcttct ccataaccac caagccacta
1021 atatgatagc attactcaca ggggccttgg tgactggagt agataaagga tctaaagcaa
1081 atatatggaa acaggctgta gtggatgtca tggaaaagac aatgtttcta ttgaatcata
1141 ttgttgatgg ttctttggat gaaggtgtgg cctatggaag ctacacagct aaatccgtca
1201 cacagtatgt ttttctggcc cagcgccatt ttaatatcaa caacttggat aataactggt
1261 taaagatgca cttttggttc tattatgcca cccttttacc tggcttccaa agaactgtgg
1321 gtatagcaga ttccaattat aattggtttt atggtccaga aagccagcta gttttcttgg
1381 ataagttcat cttaaagaat ggagctggaa attggttagc tcagcaaatt agaaagcacc
1441 gacctaaaga tggaccgatg gttccttcaa ctgcccaaag gtggagtact cttcacactg
1501 aatacatctg gtatgatccc cagctcacac cacagccacc tgctgattat ggtactgcaa
1561 aaatacacac attccctaac tggggtgtgg ttacttatgg ggctgggttg ccaaacacac
1621 agaccaacac ctttgtgtct tttaaatctg ggaagctggg gggacgagct gtgtatgaca
1681 tagttcattt tcagccatat tcctggattg atgggtggag aagttttaac ccaggacatg
1741 agcatccaga tcagaactca tttacttttg cccccaatgg acaagtattt gtttctgaag
1801 ctctctatgg acccaagttg agccacctta acaatgtatt ggtgtttgct ccatcaccct
1861 caagccagtg taataagccc tgggaaggtc aactgggaga atgtgcgcag tggcttaagt
1921 ggactggcga ggaggttggt gatgcagctg gggaaataat cactgcctct caacatgggg
1981 aaatggtatt tgtgagtggg gaagccgtgt ctgcttattc ttcagcaatg agactgaaaa
2041 gtgtatatcg tgctttgctt ctcttaaatt cccaaactct gctagttgtt gatcatattg
2101 agaggcaaga agattcccca ataaattctg tcagtgcctt ctttcataat ttggatattg
2161 attttaaata tatcccatat aagtttatga ataggtataa tggtgccatg atggatgtgt
2221 gggatgcaca ttacaaaatg ttttggtttg atcatcatgg caatagtccc atggccagta
2281 tacaggaagc agagcaagct gctgaattta aaaaacgatg gactcaattt gttaatgtta
2341 cttttcagat ggaacccaca atcacaagaa ttgcatatgt cttttatggg ccatatatca
2401 atgtctccag ctgcagattt attgatagtt ccaatcctgg acttcagatt tctctcaatg
2461 tcaataatac tgaacatgtt gtttctattg taactgatta ccataacctg aagacaagat
2521 tcaattatct gggattcggt ggctttgcca gtgtggctga tcaaggccaa ataacccgat
2581 ttggtttggg cactcaagca atagtaaagc ctgtaagaca tgataggatt attttcccct
2641 ttggatttaa atttaatata gcagttggat taaaaaaaaa aaaaaaaaaa aa
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