LOCUS BC062556 3111 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens breast cancer anti-estrogen resistance 1, mRNA (cDNA
clone MGC:71216 IMAGE:6427808), complete cds.
ACCESSION BC062556
VERSION BC062556.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3111)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3111)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44662835.
FEATURES Location/Qualifiers
source 1..3111
/db_xref="H-InvDB:HIT000260468"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71216 IMAGE:6427808"
/tissue_type="Lung, epidermoid carcinoma"
/clone_lib="NIH_MGC_101"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..3111
/gene="BCAR1"
/gene_synonym="CAS"
/gene_synonym="CRKAS"
/gene_synonym="P130Cas"
/db_xref="GeneID:9564"
/db_xref="HGNC:HGNC:971"
/db_xref="MIM:602941"
CDS 2..2614
/gene="BCAR1"
/gene_synonym="CAS"
/gene_synonym="CRKAS"
/gene_synonym="P130Cas"
/codon_start=1
/product="breast cancer anti-estrogen resistance 1"
/protein_id="AAH62556.1"
/db_xref="GeneID:9564"
/db_xref="HGNC:HGNC:971"
/db_xref="MIM:602941"
/translation="MNHLNVLAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWW
LCSLHGRQGIVPGNRLKILVGMYDKKPAGPGSGPPATPAQPQPGLHAPAPPASQYTPM
LPNTYQPQPDSVYLVPTPSKAQQGLYQVPGPSPQFQSPPAKQTSTFSKQTPHHPFPNP
ATDLYQVPPGPGGPAQDIYQVPPSAGMGHDIYQVPPSMDTRSWEGTKPPAKVVVPTRV
GQGYVYEAAQPEQDEYDIPRHLLAPGPQDIYDVPPVRGLLPSQYGQEVYDTPPMAVKG
PNGRDPLLEVYDVPPSVEKGLPPSNHHAVYDVPPSVSKDVPDGPLLREETYDVPPAFA
KAKPFDPARTPLVLAAPPPDSPPAEDVYDVPPPAPDLYDVPPGLRRPGPGTLYDVPRE
RVLPPEVADGGVVDSGVYAVPPPAEREAPAEGKRLSASSTGSTRSSQSASSLEVAGPG
REPLELEVAVEALARLQQGVSATVAHLLDLAGSAGATGSWRSPSEPQEPLVQDLQAAV
AAVQSAVHELLEFARSAVGNAAHTSDRALHAKLSRQLQKMEDVHQTLVAHGQALDAGR
GGSGATLEDLDRLVACSRAVPEDAKQLASFLHGNASLLFRRTKATAPGPEGGGTLHPN
PTDKTSSIQSRPLPSPPKFTSQDSPDGQYENSEGGWMEDYDYVHLQGKEEFEKTQKEL
LEKGSITRQGKSQLELQQLKQFERLEQEVSRPIDHDLANWTPAQPLAPGRTGGLGPSD
RQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDT
LSRQAKAADVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHS
TQQFRRVLGQLAAA"
BASE COUNT 586 a 1058 c 965 g 502 t
ORIGIN
1 catgaaccac ctgaacgtgc tggccaaagc gctctatgac aatgtggccg agtccccgga
61 tgagctctcc ttccgcaagg gtgacatcat gacggtgctg gagcaggaca cgcagggcct
121 ggacggctgg tggctctgct cgctgcatgg gcgccagggc atcgtgcctg ggaaccgcct
181 caagatcttg gtgggcatgt atgataagaa gccagcaggg cctggctccg gccctcccgc
241 caccccggcc cagcctcagc ctggcctcca tgccccagcg cctccggcct cccagtacac
301 gcccatgctc cccaacacct accagcccca gccagacagc gtctacctgg tgcccactcc
361 cagcaaggct cagcaaggcc tctaccaagt cccgggtccc agccctcagt tccagtctcc
421 cccagccaag cagacatcca ccttctcgaa gcagacaccc catcacccgt ttcccaaccc
481 ggccacagac ctgtaccagg tgcccccagg gcctggaggc cctgcccagg atatttacca
541 ggtgccacct tctgccggga tggggcatga catctaccag gtccccccgt ccatggacac
601 acgcagctgg gagggcacga agcccccggc aaaggtggtg gtgcccaccc gcgtggggca
661 gggctatgta tacgaggccg cccagccgga gcaggacgag tacgacatcc cgcgacacct
721 gctggccccg gggccacagg acatctatga tgtgcccccg gttcgggggc tgcttcccag
781 ccagtatggc caggaggtgt atgacacacc ccccatggct gtcaagggtc ccaatggccg
841 agacccgttg ctggaggtgt atgacgtgcc ccccagtgtg gagaagggcc tgccaccgtc
901 caaccaccac gcagtctacg acgttcctcc atcggtgagc aaggatgtgc ccgatggccc
961 actgctgcgt gaggagacct acgatgtgcc ccccgccttc gccaaggcca agccctttga
1021 cccggcccgc accccactgg tactggctgc gccccctcca gactccccgc cggccgagga
1081 cgtgtatgac gtgccgcccc cggctcctga cctctacgac gtgccccctg gcttgcggcg
1141 gcctggcccg ggcaccctgt acgatgtgcc ccgtgaacgg gtgcttcctc ctgaggtggc
1201 tgatggtggc gtggtcgaca gtggtgtgta tgcggtgcct cccccagctg aacgtgaagc
1261 cccggcagag ggcaagcgcc tgtcggcctc cagcaccggc agcacacgca gcagccagtc
1321 tgcgtcctcc ttggaggtgg cagggccggg ccgggaaccc ctggagctgg aagttgctgt
1381 ggaggccctg gcacggctgc agcagggtgt gagcgccacc gttgcccacc ttctggacct
1441 ggcaggcagc gccggtgcga ctgggagctg gcgtagcccc tctgagccac aggagccgct
1501 ggtgcaggac ctgcaggctg ctgtggccgc cgtccagagt gccgtccacg agctgttgga
1561 gtttgcccgc agcgcggtgg gcaatgctgc ccacacatct gaccgtgccc tgcatgccaa
1621 gcttagccgg cagctgcaga agatggagga cgtgcaccag acgctggtgg cacatggtca
1681 ggccctcgac gctggccggg gaggctctgg agccaccctt gaggacctgg accggctggt
1741 ggcctgctcg cgggctgtgc ccgaggacgc caagcagctg gcctccttcc tgcacggcaa
1801 tgcctcactg ctcttcagac ggaccaaggc cactgccccg gggcctgagg ggggtggcac
1861 cctgcacccc aaccccactg acaagaccag cagcatccag tcacgacccc tgccctcacc
1921 ccctaagttc acctcccagg actcgccaga tgggcagtac gagaacagcg aggggggctg
1981 gatggaggac tatgactacg tccacctaca ggggaaggag gagtttgaga agacccagaa
2041 ggagctgctg gaaaagggca gcatcacgcg gcagggcaag agccagctgg agttgcagca
2101 gctgaagcag tttgaacgac tggaacagga ggtgtcacgg cccatagacc acgacctggc
2161 caactggacg ccagcccaac ccctggcccc ggggcgaaca ggcggcctgg ggccctcgga
2221 ccggcagctg ctgctcttct acctggagca gtgtgaggcc aacctgacca cactgaccaa
2281 cgccgtggac gccttcttta ccgccgtggc caccaaccag ccgcccaaga tctttgtggc
2341 gcacagcaag ttcgtcatcc tcagcgccca caagctggtg ttcatcgggg acacactgtc
2401 acggcaggcc aaggctgctg acgtgcgcag ccaggtgacc cactacagca acctgctgtg
2461 cgacctcctg cgcggcatcg tggccaccac caaggccgct gccttgcagt acccatcgcc
2521 ttccgcggcc caggacatgg tggagagggt caaggagctg ggccacagca cccagcagtt
2581 ccgccgcgtc ctaggccagc tggcagccgc ctgagggtgg tgaccccagg agggaggcag
2641 gggaggggtg cggcggtccc agctccctgg ctcccatgtc aagagtcgct gtgccacagg
2701 cttagggaca ggaccccagc tctgcgtcgg tcctggtgcc ctggatgccc aggaatctgt
2761 atatatttat ggccgggcag ggtgtggggc catgcctcct caggagccga agcccagggg
2821 ccggccagtg gccttcccca gcatgcacca cgggcccggg ttgggtcacc agacggggct
2881 ggagtgtgag ggtcctgcag cctgcaggac ctcgtgccac cccgagggct gagcctggtc
2941 ccacgagggt gccgtgtccc ctgacagggc cagtgcagtt tggtgtgtcc tccgcctttc
3001 caggagaaga acctgaagaa ctatttttcg ttattggttt tccaatcatt tgactaagag
3061 tctccattta aataaagttt ttaaaaggaa aaaaaaaaaa aaaaaaaaaa a
//