LOCUS BC062442 997 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens HEAT repeat containing 1, mRNA (cDNA clone
IMAGE:30318425), complete cds.
ACCESSION BC062442
VERSION BC062442.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 997)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 997)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 51 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56090478
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..997
/db_xref="H-InvDB:HIT000260405"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30318425"
/tissue_type="Blood vessels- blood vessel, aorta, basilar
artery."
/clone_lib="NIH_MGC_187"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..997
/gene="HEATR1"
/gene_synonym="BAP28"
/gene_synonym="FLJ10359"
/gene_synonym="MGC72083"
/gene_synonym="RP11-385F5.3"
/db_xref="GeneID:55127"
CDS 104..466
/gene="HEATR1"
/gene_synonym="BAP28"
/gene_synonym="FLJ10359"
/gene_synonym="MGC72083"
/gene_synonym="RP11-385F5.3"
/codon_start=1
/product="HEATR1 protein"
/protein_id="AAH62442.1"
/db_xref="GeneID:55127"
/translation="MTSLAQQLQRLALPQSDASLLSRDEVASLLFDPKEAATIDRDTA
FAIGCTGLEELLGIDPSFEQFEAPLFSQLAKTLERSVQTKAVNKQLDENISLFLIHLS
PYFLLKPAQKCLEWLIHR"
BASE COUNT 287 a 201 c 236 g 273 t
ORIGIN
1 ggggggtacc atgtgggaag cgctgtgaag agttgttgcc ttccaagata tacccaaatt
61 cccagttcca gcccgtgtca ttaaaactcc gctggcgtga aagatgacgt ccttagccca
121 gcagctgcaa cgactcgccc tccctcaaag tgatgccagc ctcttatcca gagatgaagt
181 tgcttctttg ttatttgacc ctaaggaagc ggccacaatc gacagggaca ccgccttcgc
241 cattggatgt actggcctgg aagagttgct tggaattgat ccttcctttg agcagtttga
301 agcaccgttg ttcagtcagc tagcaaaaac cttggagcga agtgttcaga ccaaagcagt
361 aaacaaacag ttggatgaaa acatttcatt attccttatt cacttgtcgc cttacttcct
421 gcttaagcca gcacagaagt gtctggagtg gttgattcac aggtagctaa tagaattaca
481 gaaataacta tgggttaatc actttggtct tgtaaaaaat taagtagttg agaacttatc
541 aaattaaagc tgaaaaatta ggtatattaa gagattgata caatgtccat tgtgtgagat
601 aagcatgctc ttctgccttt aaattctttt ttgttgatag tgaaaagtag aactactggt
661 gattttgagt aaatggtcta acctcattag tttttttttg agatggagtc ttgctgggca
721 ctcaggctgg agtgcaatat tgaaatcttg gctcactgca acctctgcct cccgggttca
781 ggtggttctc ccatctctac taaagtaaaa aaaaaaaaaa tagctgggca tggtggtatg
841 cgtttgtggt cccagctgct tgggaggcgg aggcgggaga atcttttgaa cttggaggtg
901 gaggttgcag tgagccgaga ttgtgccact gcactccagc ctgggcaaca gcaagactcc
961 ctctcggaaa aaaaagaaaa aaaaaaaaaa aaaaaaa
//