LOCUS BC062416 836 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Josephin domain containing 2, mRNA (cDNA clone
MGC:70603 IMAGE:6503623), complete cds.
ACCESSION BC062416
VERSION BC062416.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 836)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 836)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: j Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923878.
FEATURES Location/Qualifiers
source 1..836
/db_xref="H-InvDB:HIT000260379"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70603 IMAGE:6503623"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..836
/gene="JOSD2"
/gene_synonym="SBBI54"
/db_xref="GeneID:126119"
/db_xref="HGNC:HGNC:28853"
CDS 80..646
/gene="JOSD2"
/gene_synonym="SBBI54"
/codon_start=1
/product="Josephin domain containing 2"
/protein_id="AAH62416.1"
/db_xref="GeneID:126119"
/db_xref="HGNC:HGNC:28853"
/translation="MSQAPGAQPSPPTVYHERQRLELCAVHALNNVLQQQLFSQEAAD
EICKRLAPDSRLNPHRSLLGTGNYDVNVIMAALQGLGLAAVWWDRRRPLSQLALPQVL
GLILNLPSPVSLGLLSLPLRRRHWVALRQVDGVYYNLDSKLRAPEALGDEDGVRAFLA
AALAQGLCEVLLVVTKEVEEKGSWLRTD"
BASE COUNT 148 a 282 c 278 g 128 t
ORIGIN
1 agccgccgcc caggaagggg atgcggaaac ccctggctcg gtggagcgga gaggcaggcg
61 ggcaggagcc gaggacggca tgtcccaggc cccgggagca cagccgagcc cacccaccgt
121 gtaccacgaa cggcagcgcc tggagctgtg tgctgtccac gccctcaaca acgttctgca
181 gcagcagctc tttagccagg aggctgccga tgagatctgc aagaggttgg ccccagactc
241 ccggctgaac cctcatcgca gcctcctggg caccggcaac tatgatgtca atgtgatcat
301 ggccgctctg caggggctgg gcctggccgc cgtgtggtgg gacaggagga ggcccctgtc
361 ccagctggcc ctgccccagg tactggggct gatcctgaac ctgccctcgc ccgtgtcgct
421 ggggctgctg tcactgccgc tgcgccggcg gcactgggtg gccctgcgcc aggtggacgg
481 tgtctactac aacctggact ccaagctgcg ggcgcccgag gccctggggg atgaggacgg
541 agtcagggcc ttcctggcgg ctgcgctggc ccagggcctg tgcgaggtgc tgctggtagt
601 gaccaaggag gtggaggaga agggcagctg gctgcggaca gactgaccat ggctgaccat
661 cggcgcccac agcgcagtcc ctgcgcatcc ccctccggct gcgcacactg catgcctggg
721 aaaggccagc acttcatgga ccctggggag gccccgcccc ctccccacac ccctgctccc
781 cactgccgct gctgcctcaa taaatctgct gatttgctgc caaaaaaaaa aaaaaa
//