LOCUS       BC062344                2330 bp    mRNA    linear   HUM 23-JUN-2005
DEFINITION  Homo sapiens patched domain containing 1, mRNA (cDNA clone
            IMAGE:6579014), complete cds.
ACCESSION   BC062344
VERSION     BC062344.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2330)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 50 Row: o Column: 12
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 27735090
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..2330
                     /db_xref="H-InvDB:HIT000260344"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:6579014"
                     /tissue_type="Ovary, teratocarcinoma"
                     /clone_lib="NIH_MGC_109"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2330
                     /gene="PTCHD1"
                     /gene_synonym="FLJ30296"
                     /db_xref="GeneID:139411"
     CDS             410..1180
                     /gene="PTCHD1"
                     /gene_synonym="FLJ30296"
                     /codon_start=1
                     /product="PTCHD1 protein"
                     /protein_id="AAH62344.1"
                     /db_xref="GeneID:139411"
                     /translation="MLDQHHTDLILKLHAAVTKIQVPRPGFNYTFAHICILNNDKTCI
                     VDDIVHVLEELKNARATNRTNFAITYPITHLKDGRAVYNGHQLGGVTVHSKDRVKSAE
                     AIQLTYYLQSINSLNDMVAERWESSFCDTVRLFQKSNSKVKMYPYTSSSLREDFQKTS
                     RVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLGLLGLVTISLATLTAAGIINLTGG
                     KYNSTFLGVPFVMLGNYYSSFFCFRLLVVLTRFLKGQE"
BASE COUNT          597 a          598 c          564 g          571 t
ORIGIN      
        1 atttggaagg aggcgtgatt tccacgttcg agcgtcttcg ctccccaccc cctctcggca
       61 ccagccagtg cgcgccacca cctgagcctg gcgagagccg ggacgcacgc agtcttcagc
      121 ctgctccttt aagcctctgg agagactcgg ctctgagcgg gtccgcccga cacccgcccc
      181 ctccccccac tcctgagaac tctttacttt ttgtttggaa aatcggggcc atttctttat
      241 ttatctctgg gtcttcccgg aggagggcag agaaggggag agcaagatcg agcgcaacct
      301 cgttaacagc ctcttcccgg tcaaccgctc caagcaccgt ctctactcgg acctgcagac
      361 ccccgggcgc tacggccggg tcatcgtcac ctccttccag aaagccaaca tgctggacca
      421 gcatcacacc gacctgatct taaagttgca tgctgctgtc accaagatcc aggttccaag
      481 gcctggtttt aattacacgt ttgcccatat atgtatcctg aataatgata agacttgcat
      541 cgtggatgac atagtgcacg tcctggaaga gctaaagaat gctcgggcca ccaatcggac
      601 caattttgct atcacatacc caatcactca cttaaaggac gggagggctg tgtacaatgg
      661 gcaccagctt gggggcgtca ctgtgcacag caaagaccgg gtgaaatctg cagaggccat
      721 ccagctcacc tactacctgc agtcaatcaa cagtctcaat gacatggtgg ctgagaggtg
      781 ggagtccagc ttctgcgaca ctgtcagact gtttcagaaa tccaacagca aagtcaaaat
      841 gtacccttac acgtcctcct cactgaggga agatttccag aagaccagcc gcgtatcaga
      901 acgttacctg gtcaccagcc tgattctggt ggttaccatg gccatcctgt gttgctctat
      961 gcaggactgc gtccgcagca aaccctggct aggcctgctc ggattggtga ccataagcct
     1021 ggccactctc actgcagccg ggatcatcaa tcttactggt gggaaatata attccacctt
     1081 cctgggagtc cctttcgtca tgctaggtaa ttactactct tctttcttct gtttccgcct
     1141 gctggtggtg ttgactaggt tcctaaaagg ccaggagtag ccttctaaca actttgtttc
     1201 atttaacagt atcttcattt tgcccaaaag tcctgggacc cactctataa agtgctggta
     1261 atcagcaaaa aacaacctaa tctggtaaat gtgccagaag ttcaaagtcc tgggttctag
     1321 cgctgactct ccattgagca gccatgtggt gtctagcagg tattaatctt ctccttgtcc
     1381 cagtgtctta ggttgggctt ccccataagc agggccctga gaaaaagatt tggatacaag
     1441 tagtgtattt gggaggtgag cccaggaagc accagtatgg gagtgaggaa gtggaagttg
     1501 aaggcacttc agttgaaggc aggcagttga aggtatgtta atgagcccaa gatatatcac
     1561 attctgccgg ttgctgtggg cacctgtggt tcagccccac aggggacctt tgggagacct
     1621 tgtgaaacac acctcagaga ggtcctcccc cggggtgagg aatttgggct attttcccac
     1681 agaccctttg tgattcattg agggctgctc cccaggccag ttaactgcca gcacttccca
     1741 gggaggtgct cctgcagcac actcctgcag ccagagaaat ccttcaggtg actttgtagt
     1801 tataagcctt cagcaagctc aagaatgggg aatgggaggg catgttgggt tggcactgag
     1861 agcgcctgct actctcagtt tccccacctt atgaatagag tggatgtgag catcacacaa
     1921 aaggacatga taaatgtata agaactttga aagtgacatg tgagatacca gtaggaagta
     1981 actttttttc ctattcttac tatgaactca ggagaatatt ttaaagcgat gctgatggtg
     2041 acagcgtgct tccagtgtgt ccactcaggg ggctgctgga actccctgat agagattaat
     2101 ggtcaaaaca aagccatagt ggccataaca tcggttgccc tgtccatctg ttatcgaaaa
     2161 tggcatgccc agcaagcctg atggcagggt tcttgcgggc caaggattca agaggttcac
     2221 tttccccctt ttctatggta gcttctcatc aattccttta acaaaattaa aatgtcattt
     2281 ggaatcagaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//